Self-assembly multifunctional DNA tetrahedron for efficient elimination of antibiotic-resistant bacteria

Tiantian Wu , Yu Fu , Shuang Guo , Yanqiang Shi , Yuxin Zhang , Zhijin Fan , Bin Yang , Baoquan Ding , Yuhui Liao

Aggregate ›› 2024, Vol. 5 ›› Issue (1) : 402

PDF
Aggregate ›› 2024, Vol. 5 ›› Issue (1) :402 DOI: 10.1002/agt2.402
RESEARCH ARTICLE

Self-assembly multifunctional DNA tetrahedron for efficient elimination of antibiotic-resistant bacteria

Author information +
History +
PDF

Abstract

Antibiotic resistance is a major challenge in the clinical treatment of bacterial infectious diseases. Herein, we constructed a multifunctional DNA nanoplatform as a versatile carrier for bacteria-specific delivery of clinical antibiotic ciprofloxacin (CIP) and classic nanoantibiotic silver nanoparticles (AgNP). In our rational design, CIP was efficiently loaded in the self-assembly double-bundle DNA tetrahedron through intercalation with DNA duplex, and single-strand DNA-modified AgNP was embedded in the cavity of the DNA tetrahedron through hybridization. With the site-specific assembly of targeting aptamer in the well-defined DNA tetrahedron, the bacteria-specific dual-antibiotic delivery system exhibited excellent combined bactericidal properties. With enhanced antibiotic accumulation through breaking the out membrane of bacteria, the antibiotic delivery system effectively inhibited biofilm formation and promoted the healing of infected wounds in vivo. This DNAbased antibiotic delivery system provides a promising strategy for the treatment of antibiotic-resistant infections.

Keywords

antibiotic resistance / anti-infection therapy / biofilm / DNA nanotechnology / targeted delivery

Cite this article

Download citation ▾
Tiantian Wu, Yu Fu, Shuang Guo, Yanqiang Shi, Yuxin Zhang, Zhijin Fan, Bin Yang, Baoquan Ding, Yuhui Liao. Self-assembly multifunctional DNA tetrahedron for efficient elimination of antibiotic-resistant bacteria. Aggregate, 2024, 5(1): 402 DOI:10.1002/agt2.402

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

R. E. Baker, A. S. Mahmud, I. F. Miller, M. Rajeev, F. Rasambainarivo, B. L. Rice, S. Takahashi, A. J. Tatem, C. E. Wagner, L.-F. Wang, A. Wesolowski, C. J. E. Metcalf, Nat. Rev. Microbiol. 2022, 20, 193.

[2]

A. R. Kirtane, M. Verma, P. Karandikar, J. Furin, R. Langer, G. Traverso, Nat. Nanotechnol. 2021, 16, 369.

[3]

E. K. Perry, L. A. Meirelles, D. K. Newman, Nat. Rev. Microbiol. 2022, 20, 129.

[4]

J. M. V Makabenta, A. Nabawy, C.-H. Li, S. Schmidt-Malan, R. Patel, V. M. Rotello, Nat. Rev. Microbiol. 2021, 19, 23.

[5]

W. Gao, L. Zhang, Nat. Rev. Microbiol. 2021, 19, 5.

[6]

S. Tang, J. Zheng, Adv. Healthc. Mater. 2018, 7, 1701503.

[7]

S. E. Birk, A. Boisen, L. H. Nielsen, Adv. Drug Delivery Rev. 2021, 174, 30.

[8]

L. M. Stabryla, K. A. Johnston, N. A. Diemler, V. S. Cooper, J. E. Millstone, S.-J. Haig, L. M. Gilbertson, Nat. Nanotechnol. 2021, 16, 996.

[9]

S. Kumar, R. K. Majhi, A. Singh, M. Mishra, A. Tiwari, S. Chawla, P. Guha, B. Satpati, H. Mohapatra, L. Goswami, C. Goswami, ACS Appl. Mater. Inter. 2019, 11, 42998.

[10]

H. Zhao, M. Wang, Y. Cui, C. Zhang, Environ. Sci. Technol. 2022, 56, 5090.

[11]

J. Chen, L. Yang, J. Chen, W. Liu, D. Zhang, P. Xu, T. Dai, L. Shang, Y. Yang, S. Tang, Y. Zhang, H. Lin, Z. Chen, M. Huang, Chem. Eng. J. 2019, 374, 1373.

[12]

Y. N. Slavin, K. Ivanova, J. Hoyo, I. Perelshtein, G. Owen, A. Haegert, Y.-Y. Lin, S. LeBihan, A. Gedanken, U. O. Häfeli, T. Tzanov, H. Bach, ACS Appl. Mater. Inter. 2021, 13, 22098.

[13]

A. Panáček, L. Kvítek, M. Smékalová, R. Večeřová, M. Kolář, M. Röderová, F. Dyčka, M. Šebela, R. Prucek, O. Tomanec, R. Zbořil, Nat Nanotechnol. 2018, 13, 65.

[14]

N. R. Kallenbach, R.-I. Ma, N. C. Seeman, Nature 1983, 305, 829.

[15]

R. P. Goodman, I. A. T. Schaap, C. F. Tardin, C. M. Erben, R. M. Berry, C. F. Schmidt, A. J. Turberfield, Science 2005, 310, 1661.

[16]

A. V. Pinheiro, D. Han, W. M. Shih, H. Yan, Nat. Nanotechnol. 2011, 6, 763.

[17]

N. C. Seeman, H. F. Sleiman, Nat. Rev. Mater. 2017, 3, 17068.

[18]

Y. He, T. Ye, M. Su, C. Zhang, A. E. Ribbe, W. Jiang, C. Mao, Nature 2008, 452, 198.

[19]

Q. Hu, H. Li, L. Wang, H. Gu, C. Fan, Chem. Rev. 2019, 119, 6459.

[20]

S. Dey, C. Fan, K. V. Gothelf, J. Li, C. Lin, L. Liu, N. Liu, M. A. D. Nijenhuis, B. Saccà, F. C. Simmel, H. Yan, P. Zhan, Nat. Rev. Methods Primers 2021, 1, 13.

[21]

H. Liang, X.-B. Zhang, Y. Lv, L. Gong, R. Wang, X. Zhu, R. Yang, W. Tan, Acc. Chem. Res. 2014, 47, 1891.

[22]

Y. Sun, Y. Liu, B. Zhang, S. Shi, T. Zhang, D. Zhao, T. Tian, Q. Li, Y. Lin, Bioact. Mater. 2021, 6, 2281.

[23]

A. Qu, X. Wu, S. Li, M. Sun, L. Xu, H. Kuang, C. Xu, Adv. Mater. 2020, 32, 2000184.

[24]

T. Wu, Q. Liu, Y. Cao, R. Tian, J. Liu, B. Ding, ACS Appl. Mater. Inter. 2020, 12, 32461.

[25]

S. Liu, Q. Jiang, X. Zhao, R. Zhao, Y. Wang, Y. Wang, J. Liu, Y. Shang, S. Zhao, T. Wu, Y. Zhang, G. Nie, B. Ding, Nat. Mater. 2021, 20, 421.

[26]

J. Liu, L. Song, S. Liu, S. Zhao, Q. Jiang, B. Ding, Angew. Chem. Int. Ed. 2018, 57, 15486.

[27]

Y. Xu, S. Jiang, C. R. Simmons, R. P. Narayanan, F. Zhang, A.-M. Aziz, H. Yan, N. Stephanopoulos, ACS Nano 2019, 13, 3545.

[28]

Y. Liu, Y. Sun, S. Li, M. Liu, X. Qin, X. Chen, Y. Lin, Nano Lett. 2020, 20 3602.

[29]

H. Lee, A. K Lytton-Jean, Y. Chen, K. T. Love, A. I. Park, E. D. Karagiannis, A. Sehgal, W. Querbes, C. S. Zurenko, M. Jayaraman, C. G. Peng, K. Charisse, A. Borodovsky, M. Manoharan, J. S. Donahoe, J. Truelove, M. Nahrendorf, R. Langer, D. G. Anderson, Nat. Nanotechnol. 2012, 7, 389.

[30]

S. Zhao, R. Tian, J. Wu, S. Liu, Y. Wang, M. Wen, Y. Shang, Q. Liu, Y. Li, Y. Guo, Z. Wang, T. Wang, Y. Zhao, H. Zhao, H. Cao, Y. Su, J. Sun, Q. Jiang, B. Ding, Nat. Commun. 2021, 12, 358.

[31]

J. S. Wolfson, D. C. Hooper, Clin. Microbiol. Rev. 1989, 2, 378.

[32]

R. Davis, A. Markham, J. A. Balfour, Drugs 1996, 51, 1019.

[33]

S. Hernando-Amado, P. Laborda, J. R. Valverde, J. L. Martínez, Proc. Natl. Acad. Sci. U. S. A. 2022, 119, 2109370119.

[34]

T. Wu, J. Liu, M. Liu, S. Liu, S. Zhao, R. Tian, D. Wei, Y. Liu, Y. Zhao, H. Xiao, B. Ding, Angew. Chem. Int. Ed. 2019, 58, 14224.

[35]

J. Liu, L. Song, S. Liu, Q. Jiang, Q. Liu, N. Li, Z.-G. Wang, B. Ding, Nano Lett. 2018, 18, 3328.

[36]

Z. M. Xiu, Q. B. Zhang, H. L. Puppala, V. L. Colvin, P. J. Alvarez, Nano Lett. 2012, 12, 4271.

[37]

E. Denamur, O. Clermont, S. Bonacorsi, D. Gordon, Nat. Rev. Microbiol. 2021, 19, 37

[38]

L. H. Caitlyn, T. A. Mark, L. T. M. Harry, A. B. Michael, Clin. Microbiol. Rev. 2021, 34, 00234-20.

[39]

A. H. Holmes, L. S. P. Moore, A. Sundsfjord, M. Steinbakk, S. Regmi, A. Karkey, P. J. Guerin, L. J. V. Piddock, Lancet 2016, 387, 176.

[40]

J. C. Nwabuife, C. A. Omolo, T. Govender, J. Control. Release 2022, 349, 338.

[41]

B. Le Ouay, F. Stellacci, Nano Today 2015, 10, 339.

[42]

L. Liu, W. Li, X. He, J. Yang, N. Liu, Small 2022, 18, 2104205.

[43]

D. Panacek, L. Hochvaldova, A. Bakandritsos, T. Malina, M. Langer, J. Belza, J. Martincova, R. Vecerova, P. Lazar, K. Polakova, J. Kolarik, L. Valkova, M. Kolar, M. Otyepka, A. Panacek, R. Zboril, Adv. Sci. 2021, 8, 2003090.

[44]

H. S. Gold, R. C. Moellering, New Engl. J. Med. 1996, 335, 1445.

[45]

D. G. J Larsson, C.-F. Flach, Nat. Rev. Microbiol. 2022, 20, 257.

[46]

A. Gupta, S. Mumtaz, C.-H. Li, I. Hussain, V. M. Rotello, Chem. Soc. Rev. 2019, 48, 415.

[47]

H. C. Flemming, J. Wingender, U. Szewzyk, P. Steinberg, S. A. Rice, S. Kjelleberg, Nat. Rev. Microbiol. 2016, 14, 563.

[48]

K. Sauer, P. Stoodley, D. M. Goeres, L. Hall-Stoodley, M. Burmølle, P. S. Stewart, T. Bjarnsholt, Nat. Rev. Microbiol. 2022, 20, 608.

[49]

Y. Liu, L. Shi, L. Su, H. C. van der Mei, P. C. Jutte, Y. Ren, H. J. Busscher, Chem. Soc. Rev. 2019, 48, 428.

[50]

S. Darvishi, S. Tavakoli, M. Kharaziha, H. H. Girault, C. F. Kaminski, I. Mela, Angew. Chem. Int. Ed. 2021, 61, 202112218.

[51]

J. Li, H. Shen, H. Zhou, R. Shi, C. Wu, P. K. Chu, Mat. Sci. Eng. R 2023, 152, 100712.

[52]

Z.-R. Li, J. Sun, Y. Du, A. Pan, L. Zeng, R. Maboudian, R. A. Burne, P.-Y. Qian, W. Zhang, Nat. Chem. Biol. 2021, 17, 576.

[53]

C. Tu, H. Lu, T. Zhou, W. Zhang, L. Deng, W. Cao, Z. Yang, Z. Wang, X. Wu, J. Ding, F. Xu, C. Gao, Biomaterials 2022, 286, 121597.

[54]

H. Zhao, J. Huang, Y. Li, X. Lv, H. Zhou, H. Wang, Y. Xu, C. Wang, J. Wang, Z. Liu, Biomaterials 2020, 258, 120286.

[55]

S. Agnihotri, S. Mukherji, S. Mukherji, RSC Adv. 2014, 4, 3974.

[56]

S. Pal, Z. Deng, B. Ding, H. Yan, Y. Liu, Angew Chem. Int. Ed. 2010, 49, 2700.

RIGHTS & PERMISSIONS

2023 The Authors. Aggregate published by SCUT, AIEI, and John Wiley & Sons Australia, Ltd.

AI Summary AI Mindmap
PDF

254

Accesses

0

Citation

Detail

Sections
Recommended

AI思维导图

/