Proteomic Screening of Early Reperfusion in Acute Ischemic Heart and Insights into Mitochondrial-Associated Cell Damage: Role of RIP3
Andrea Marciníková , Csaba Horváth , Izabela Jarabicová , Petra Majerová , Dominika Olešová , M. Saadeh Suleiman , Adriana Adameová
Frontiers in Bioscience-Landmark ›› 2025, Vol. 30 ›› Issue (2) : 27119
Regulated forms of necrosis-like cell death (e.g., necroptosis) have been shown to contribute to cardiac ischemia/reperfusion (I/R) injury. However, pro-inflammatory necroptosis is unlikely to be involved during early reperfusion and little is known about the associated molecular changes. Thus, this study aimed to provide an in-depth protein screening with a particular focus on pro-pyroptotic and mitochondrial damage-related pathways.
Langendorff-perfused rat hearts were subjected to 30-minute global ischemia followed by 10-minute reperfusion. Liquid chromatography coupled with mass spectrometry (LC-MS/MS) and immunoblotting techniques were used to study the complex cardiac proteome. In addition, calcium-induced mitochondrial swelling and lactate dehydrogenase (LDH) release were examined to assess mitochondrial stress and necrosis phenotype, respectively.
Approximately 160 proteins linked to cell death signaling, cellular metabolism, and post-translational modifications were significantly differentially expressed in I/R hearts compared to controls. Conventional proteins of pyroptosis, either of canonical or non-canonical signaling, were not affected during the short reperfusion. Notably, this type of I/R was associated with increased expression of p25 cleaved form of poly [ADP-ribose] polymerase 1 (PARP1 p25) and mature apoptosis-inducing factor (AIF), alongside nitrosative stress and mitochondrial swelling. Conversely, a receptor-interacting protein kinase 3 (RIP3) inhibitor (GSK′872, 250 nM) reversed mitochondrial swelling and plasma membrane rupture and mitigated the increase in the expression of PARP1 p25 and AIF.
This study shows for the first time that necrosis-like injury during early I/R of the isolated heart is associated with mitochondrial events, rather than pro-inflammatory pyroptotic cell death. Furthermore, the inhibition of RIP3 mitigates this injury independent of targeting pro-inflammatory signaling.
cell death / inflammation / myocardial ischemia/reperfusion / pyroptosis / receptor-interacting protein kinase 3 inhibition
| [1] |
Heusch G. Myocardial ischemia/reperfusion: Translational pathophysiology of ischemic heart disease. Med (New York, N.Y.). 2024; 5: 10–31. https://doi.org/10.1016/j.medj.2023.12.007. |
| [2] |
Perrelli MG, Pagliaro P, Penna C. Ischemia/reperfusion injury and cardioprotective mechanisms: Role of mitochondria and reactive oxygen species. World Journal of Cardiology. 2011; 3: 186–200. https://doi.org/10.4330/wjc.v3.i6.186. |
| [3] |
Soares ROS, Losada DM, Jordani MC, Évora P, Castro-E-Silva O. Ischemia/Reperfusion Injury Revisited: An Overview of the Latest Pharmacological Strategies. International Journal of Molecular Sciences. 2019; 20: 5034. https://doi.org/10.3390/ijms20205034. |
| [4] |
Zhang J, Liu D, Zhang M, Zhang Y. Programmed necrosis in cardiomyocytes: mitochondria, death receptors and beyond. British journal of pharmacology. 2019; 176: 4319–4339. https://doi.org/10.1111/bph.14363. |
| [5] |
Mishra PK, Adameova A, Hill JA, Baines CP, Kang PM, Downey JM, et al. Guidelines for evaluating myocardial cell death. American journal of physiology. Heart and circulatory physiology. 2019; 317: H891–H922. https://doi.org/10.1152/ajpheart.00259.2019. |
| [6] |
Feoktistova M, Leverkus M. Programmed necrosis and necroptosis signalling. The FEBS Journal. 2015; 282: 19–31. https://doi.org/10.1111/febs.13120. |
| [7] |
Yu P, Zhang X, Liu N, Tang L, Peng C, Chen X. Pyroptosis: mechanisms and diseases. Signal transduction and targeted therapy. 2021; 6: 128. https://doi.org/10.1038/s41392-021-00507-5. |
| [8] |
Bergsbaken T, Fink SL, Cookson BT. Pyroptosis: host cell death and inflammation. Nature reviews. Microbiology. 2009; 7: 99–109. https://doi.org/10.1038/nrmicro2070. |
| [9] |
Broz P, Pelegrín P, Shao F. The gasdermins, a protein family executing cell death and inflammation. Nature Reviews. Immunology. 2020; 20: 143–157. https://doi.org/10.1038/s41577-019-0228-2. |
| [10] |
Horvath C, Young M, Jarabicova I, Kindernay L, Ferenczyova K, Ravingerova T, et al. Inhibition of Cardiac RIP3 Mitigates Early Reperfusion Injury and Calcium-Induced Mitochondrial Swelling without Altering Necroptotic Signalling. International Journal of Molecular Sciences. 2021; 22: 7983. https://doi.org/10.3390/ijms22157983. |
| [11] |
Percie du Sert N, Hurst V, Ahluwalia A, Alam S, Avey MT, Baker M, et al. The ARRIVE guidelines 2.0: Updated guidelines for reporting animal research. PLoS Biology. 2020; 18: e3000410. https://doi.org/10.1371/journal.pbio.3000410. |
| [12] |
Mangiola S, Papenfuss AT. tidyHeatmap: an R package for modular heatmap production based on tidy principles. Journal of Open Source Software. 2020; 5: 2472. https://doi.org/10.21105/joss.02472. |
| [13] |
Khaliulin I, Parker JE, Halestrap AP. Consecutive pharmacological activation of PKA and PKC mimics the potent cardioprotection of temperature preconditioning. Cardiovascular Research. 2010; 88: 324–333. https://doi.org/10.1093/cvr/cvq190. |
| [14] |
Suleiman MS, Halestrap AP, Griffiths EJ. Mitochondria: a target for myocardial protection. Pharmacology & Therapeutics. 2001; 89: 29–46. https://doi.org/10.1016/s0163-7258(00)00102-9. |
| [15] |
Khaliulin I, Halestrap AP, Bryant SM, Dudley DJ, James AF, Suleiman MS. Clinically-relevant consecutive treatment with isoproterenol and adenosine protects the failing heart against ischaemia and reperfusion. Journal of Translational Medicine. 2014; 12: 139. https://doi.org/10.1186/1479-5876-12-139. |
| [16] |
Moritz CP. Tubulin or Not Tubulin: Heading Toward Total Protein Staining as Loading Control in Western Blots. Proteomics. 2017; 17. https://doi.org/10.1002/pmic.201600189. |
| [17] |
UniProt Consortium. UniProt: the Universal Protein Knowledgebase in 2023. Nucleic Acids Research. 2023: 51: D523–D531. https://doi.org/10.1093/nar/gkac1052. |
| [18] |
Chen CL, Zhang L, Jin Z, Kasumov T, Chen YR. Mitochondrial redox regulation and myocardial ischemia-reperfusion injury. American journal of physiology. Cell Physiology. 2022; 322: C12–C23. https://doi.org/10.1152/ajpcell.00131.2021. |
| [19] |
Nakagawa T, Shimizu S, Watanabe T, Yamaguchi O, Otsu K, Yamagata H, et al. Cyclophilin D-dependent mitochondrial permeability transition regulates some necrotic but not apoptotic cell death. Nature. 2005; 434: 652–658. https://doi.org/10.1038/nature03317. |
| [20] |
Wang Y, Dawson VL, Dawson TM. Poly(ADP-ribose) signals to mitochondrial AIF: a key event in parthanatos. Experimental Neurology. 2009; 218: 193–202. https://doi.org/10.1016/j.expneurol.2009.03.020. |
| [21] |
Toldo S, Mezzaroma E, Van Tassell BW, Farkas D, Marchetti C, Voelkel NF, et al. Interleukin-1β blockade improves cardiac remodelling after myocardial infarction without interrupting the inflammasome in the mouse. Experimental Physiology. 2013; 98: 734–745. https://doi.org/10.1113/expphysiol.2012.069831. |
| [22] |
Qiu Z, Lei S, Zhao B, Wu Y, Su W, Liu M, et al. NLRP3 Inflammasome Activation-Mediated Pyroptosis Aggravates Myocardial Ischemia/Reperfusion Injury in Diabetic Rats. Oxidative Medicine and Cellular Longevity. 2017; 2017: 9743280. https://doi.org/10.1155/2017/9743280. |
| [23] |
Lou Y, Wang S, Qu J, Zheng J, Jiang W, Lin Z, et al. miR-424 promotes cardiac ischemia/reperfusion injury by direct targeting of CRISPLD2 and regulating cardiomyocyte pyroptosis. International Journal of Clinical and Experimental Pathology. 2018; 11: 3222–3235. |
| [24] |
Martinon F, Burns K, Tschopp J. The Inflammasome: a molecular platform triggering activation of inflammatory caspases and processing of proIL-beta. Molecular Cell. 2002; 10: 417–426. https://doi.org/10.1016/s1097-2765(02)00599-3. |
| [25] |
Shi H, Gao Y, Dong Z, Yang J, Gao R, Li X, et al. GSDMD-Mediated Cardiomyocyte Pyroptosis Promotes Myocardial iR Injury. Circulation Research. 2021; 129: 383–396. https://doi.org/10.1161/CIRCRESAHA.120.318629. |
| [26] |
Mastrocola R, Penna C, Tullio F, Femminò S, Nigro D, Chiazza F, et al. Pharmacological Inhibition of NLRP3 Inflammasome Attenuates Myocardial Ischemia/Reperfusion Injury by Activation of RISK and Mitochondrial Pathways. Oxidative Medicine and Cellular Longevity. 2016; 2016: 5271251. https://doi.org/10.1155/2016/5271251. |
| [27] |
Zhang J, Huang L, Shi X, Yang L, Hua F, Ma J, et al. Metformin protects against myocardial ischemia-reperfusion injury and cell pyroptosis via AMPK/NLRP3 inflammasome pathway. Aging. 2020; 12: 24270–24287. https://doi.org/10.18632/aging.202143. |
| [28] |
Jorgensen I, Miao EA. Pyroptotic cell death defends against intracellular pathogens. Immunological Reviews. 2015; 265: 130–142. https://doi.org/10.1111/imr.12287. |
| [29] |
Miao EA, Rajan JV, Aderem A. Caspase‐1‐induced pyroptotic cell death. Immunological Reviews. 2011; 243: 206–214. https://doi.org/10.1111/j.1600-065X.2011.01044.x. |
| [30] |
Liang J, Wang Q, Li JQ, Guo T, Yu D. Long non-coding RNA MEG3 promotes cerebral ischemia-reperfusion injury through increasing pyroptosis by targeting miR-485/AIM2 axis. Experimental Neurology. 2020; 325: 113139. https://doi.org/10.1016/j.expneurol.2019.113139. |
| [31] |
Li XQ, Yu Q, Fang B, Zhang ZL, Ma H. Knockdown of the AIM2 molecule attenuates ischemia-reperfusion-induced spinal neuronal pyroptosis by inhibiting AIM2 inflammasome activation and subsequent release of cleaved caspase-1 and IL-1β. Neuropharmacology. 2019; 160: 107661. https://doi.org/10.1016/j.neuropharm.2019.05.038. |
| [32] |
Poh L, Kang SW, Baik SH, Ng GYQ, She DT, Balaganapathy P, et al. Evidence that NLRC4 inflammasome mediates apoptotic and pyroptotic microglial death following ischemic stroke. Brain, Behavior, and Immunity. 2019; 75: 34–47. https://doi.org/10.1016/j.bbi.2018.09.001. |
| [33] |
Bertheloot D, Latz E, Franklin BS. Necroptosis, pyroptosis and apoptosis: an intricate game of cell death. Cellular & Molecular Immunology. 2021; 18: 1106–1121. https://doi.org/10.1038/s41423-020-00630-3. |
| [34] |
Shen S, He F, Cheng C, Xu B, Sheng J. Uric acid aggravates myocardial ischemia–reperfusion injury via ROSNLRP3 pyroptosis pathway. Biomedicine & Pharmacotherapy. 2021; 133: 110990. https://doi.org/10.1016/j.biopha.2020.110990. |
| [35] |
Szobi A, Farkašová-Ledvényiová V, Lichý M, Muráriková M, Čarnická S, Ravingerová T, et al. Cardioprotection of ischaemic preconditioning is associated with inhibition of translocation of MLKL within the plasma membrane. Journal of Cellular and Molecular Medicine. 2018; 22: 4183–4196. https://doi.org/10.1111/jcmm.13697. |
| [36] |
Fauconnier J, Meli AC, Thireau J, Roberge S, Shan J, Sassi Y, et al. Ryanodine receptor leak mediated by caspase-8 activation leads to left ventricular injury after myocardial ischemia-reperfusion. Proceedings of the National Academy of Sciences of the United States of America. 2011; 108: 13258–13263. https://doi.org/10.1073/pnas.1100286108. |
| [37] |
Kim G, Chun Y, Park J, Kim M. Role of apoptosis-inducing factor in myocardial cell death by ischemia–reperfusion. Biochemical and Biophysical Research Communications. 2003; 309: 619–624. https://doi.org/10.1016/j.bbrc.2003.08.045. |
| [38] |
Kyoi S, Otani H, Matsuhisa S, Akita Y, Enoki C, Tatsumi K, et al. Role of oxidative/nitrosative stress in the tolerance to ischemia/reperfusion injury in cardiomyopathic hamster heart. Antioxidants & Redox Signaling. 2006; 8: 1351–1361. https://doi.org/10.1089/ars.2006.8.1351. |
| [39] |
Song ZF, Ji XP, Li XX, Wang SJ, Wan SH, Zhang Y. Inhibition of the activity of poly (ADP-ribose) polymerase reduces heart ischaemia/reperfusion injury via suppressing JNK-mediated AIF translocation. Journal of cellular and molecular medicine. 2008; 12; 1220–1228. https://doi.org/10.1111/j.1582-4934.2008.00183.x. |
| [40] |
Hong SJ, Dawson TM, Dawson VL. Nuclear and mitochondrial conversations in cell death: PARP-1 and AIF signaling. Trends in Pharmacological Sciences. 2004; 25: 259–264. https://doi.org/10.1016/j.tips.2004.03.005. |
| [41] |
Schriewer JM, Peek CB, Bass J, Schumacker PT. ROS-mediated PARP activity undermines mitochondrial function after permeability transition pore opening during myocardial ischemia-reperfusion. Journal of the American Heart Association. 2013; 2: e000159. https://doi.org/10.1161/JAHA.113.000159. |
| [42] |
Hu W, Wu X, Yu D, Zhao L, Zhu X, Li X, et al. Regulation of JNK signaling pathway and RIPK3/AIF in necroptosis-mediated global cerebral ischemia/reperfusion injury in rats. Experimental Neurology. 2020; 331: 113374. https://doi.org/10.1016/j.expneurol.2020.113374. |
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