Investigation of HLA-DRB1 and IL28 gene polymorphism in patients with varying severity of COVID-19 infection

S. N Kolyubaeva , A. A Kondratenko , K. Alkhazhe , E. V Kryukov , В. С Чирский , V. A Kachnov , R. I Glushakov , T. S Sveklina , L. A Myakoshina , M. S Tyuryupov , E. G Neronova , M. I Eliseeva

Genes & Cells ›› 2021, Vol. 16 ›› Issue (3) : 86 -90.

PDF
Genes & Cells ›› 2021, Vol. 16 ›› Issue (3) : 86 -90. DOI: 10.23868/202110012
Articles
research-article

Investigation of HLA-DRB1 and IL28 gene polymorphism in patients with varying severity of COVID-19 infection

Author information +
History +
PDF

Abstract

The work analyzed the polymorphisms of the HLA-DRB1 and IL28 genes in 100 patients who underwent COVID-19 with the development of infection with varying degrees of severity. To a mild degree of severity were patients without complications in the form of infectious pneumonate, to moderate and severe degrees - with the development of pneumonate with varying degrees of lung damage. In general, the distribution of alleles in patients with COVID-19 did not differ from the distribution of average values in Russia. However, the HLA-DRB1 *01 и *07 alleles were more common. Comparison of the frequency of HLA-DRB1 alleles in patients with COVID-19 with varying severity revealed more common alleles of *13 and *07 in the severety severe group. However, with OR of 3.2 and 1.8, their confidence intervals (CL) were in the range of 0.9-9.8 and 0.7-4.5 respectively. At severe severity, the presence of homozigotic variants of allele *07 is noted. (Fisher exact test, r.0.04). As for the IL28B gene, no statistically significant differences from the control group were found.

Keywords

patients / severity of the disease / infectious pneumonit / polymorphism of genes HLA-DRB1 and IL28B / alleles

Cite this article

Download citation ▾
S. N Kolyubaeva, A. A Kondratenko, K. Alkhazhe, E. V Kryukov, В. С Чирский, V. A Kachnov, R. I Glushakov, T. S Sveklina, L. A Myakoshina, M. S Tyuryupov, E. G Neronova, M. I Eliseeva. Investigation of HLA-DRB1 and IL28 gene polymorphism in patients with varying severity of COVID-19 infection. Genes & Cells, 2021, 16(3): 86-90 DOI:10.23868/202110012

登录浏览全文

4963

注册一个新账户 忘记密码

References

[1]

Ganna A., Vadgama N., Chaudhary K. et al. Mapping the human genetic architecture of COVID-19, https://www.researchgate.net/publication/353092045_Mapping_the_human_genetic_architec-ture_of_COVID-19.

[2]

Йокота Ш., Куройва Е., Нишиока К. Новая коронавирусная болезнь (COVID-19) и «цитокиновый шторм». Перспективы эффективного лечения с точки зрения патофизиологии воспалительного процесса. Инфекционные болезни: новости, мнения, обучение 2020; 9(4): 13-25

[3]

Langton D.J., Bourke S.C., Lie B.A. et al. The influence of HLA genotype on the severity of COVID-19 infection. HLA 2021; 98(1): 14-22.

[4]

Di Maria E., Latini A., Borgiani P. et al. Genetic variants of the human host influencing the coronavirus-associated phenotypes (SARS, MERS and COVID-19): rapid systematic review and field synopsis. Human Genomics 2020; 14(1): 30-1.

[5]

Соловьева Н.А., Куртанов Х.А., Павлова Н.И. и др. Aссоциация генов DRB1, DQA1, DQB системы HLA 2 го класса с риском развития сахарного диабета 1-го типа в якутской популяции. Современные проблемы науки и образования 2019; 2: 147

[6]

Zhang M., Lin S., Yuan X. et al. HLA-DQB1 and HLA-DRB1 Variants Confer Susceptibility to Latent Autoimmune Diabetes in Adults: Relative Predispositional Effects among Allele Groups. Genes 2019; 10(9): 710.

[7]

Das S., Baruah C., Saikia A.K. et al. Associative role of HLA-DRB1 SNP genotypes as risk factors for susceptibility and severity of rheumatoid arthritis: A North-east Indian population-based study. Int. J. Immunogenetic. 2017; 45(1): 1-7.

[8]

Klimenta B., Nefic H., Prodanovic N. et al. Association of biomarkers of inflammation and HLA-DRB1 gene locus with risk of developing rheumatoid arthritis in females. Rheumatol. Int. 2019; 39(12): 2147-57.

[9]

Huang J., Huang K., Xu R. et al. The Associations of HLA-A*02:01 and DRB1*11:01 with Hepatitis C. Virus Spontaneous Clearance Are Independent of IL28B in the Chinese Population. Sci. Rep. 2016; 6(1): 31485.

[10]

Huang J., Xu R., Wang M. et al. Association of HLA-DQB1*03:01 and DRB1*11:01 with spontaneous clearance of hepatitis C. virus in Chinese Li ethnicity, an ethnic group genetically distinct from Chinese Han ethnicity and infected with unique HCV subtype. J. Med. Vir. 2019; 91(10): 1830-6.

[11]

Kurbanov F., Kim Y., Latanich R. et al. IFNL3 genotype is associated with differential induction of IFNL3 in primary human hepatocytes. Antiviral Therapy 2015; 20(8): 805-14.

[12]

Oyama M., Ohnuki Y., Inoue M. et al. HLA-DRB1 allele and autoantibody profiles in Japanese patients with inclusion body myositis. Plos ONE 2020; 15(8): e0237890.

[13]

Зайцев А.А., Чернов С.А., Крюков Е.В. и др. Практический опыт ведения пациентов с новой коронавирусной инфекцией COVID-19 в стационаре (предварительные итоги и рекомендации). Лечащий врач 2020; 6: 74-9

[14]

Алянский А.Л., Кузьмич Е.В., Макаренко О.А. и др. Распределение частот HLA аллелей и гаплотипов в регистре доноров костного мозга ПСПбГМУ им. И.П. Павлова. Вестник гематологии 2015; 11(2): 5-6

[15]

Котелевская Е.А., Шунькина К.В., Смирнова С.А. и др. Генетический полиморфизм HLA-A, -b, -DRB1 локусов в СевероЗападном регионе Российской Федерации. Вестник гематологии 2015; 11(2): 16

[16]

Кузьмич Е.В., Макаренко О.А., Алянский А.Л. и др. Использование метода секвенирования для HLA типирования потенциальных доноров гемопоэтических стволовых клеток в регистре ПСПБГМУ им. И.П. Павлова. Вестник гематологии 2015; 11(2): 19

[17]

Колюбаева С.Н., Буланьков Ю.И., Скачкова О.В. и др. Прогностическая значимость вариантов полиморфизма гена интерлейкина 28в при лечении хронического вирусного гепатита С. Поликлиника 2015; 46(1): 60-2

RIGHTS & PERMISSIONS

Eco-Vector

AI Summary AI Mindmap
PDF

122

Accesses

0

Citation

Detail

Sections
Recommended

AI思维导图

/