Whole-cell one-pot biosynthesis of dodecanedioic acid from renewable linoleic acid

Yi-Ke Qi, Jiang Pan, Zhi-Jun Zhang, Jian-He Xu

Bioresources and Bioprocessing ›› 2024, Vol. 11 ›› Issue (1) : 55.

Bioresources and Bioprocessing All Journals
Bioresources and Bioprocessing ›› 2024, Vol. 11 ›› Issue (1) : 55. DOI: 10.1186/s40643-024-00770-8
Short Report

Whole-cell one-pot biosynthesis of dodecanedioic acid from renewable linoleic acid

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Abstract

Background

Dodecanedioic acid (DDA), a typical medium-chain dicarboxylic fatty acid with widespread applications, has a great synthetic value and a huge industrial market demand. Currently, a sustainable, eco-friendly and efficient process is desired for dodecanedioic acid production.

Results

Herein, a multi-enzymatic cascade was designed and constructed for the production of DDA from linoleic acid based on the lipoxygenase pathway in plants. The cascade is composed of lipoxygenase, hydroperoxide lyase, aldehyde dehydrogenase, and unidentified double-bond reductase in E. coli for the main cascade reactions, as well as NADH oxidase for cofactor recycling. The four component enzymes involved in the cascade were co-expressed in E. coli, together with the endogenous double-bond reductase of E. coli. After optimizing the reaction conditions of the rate-limiting step, 43.8 g L− 1 d− 1 of DDA was obtained by a whole-cell one-pot process starting from renewable linoleic acid.

Conclusions

Through engineering of the reaction system and co-expressing the component enzymes, a sustainable and eco-friendly DDA biosynthesis route was set up in E. coli, which afforded the highest space time yield for DDA production among the current artificial multi-enzymatic routes derived from the LOX-pathway, and the productivity achieved here ranks the second highest among the current research progress in DDA biosynthesis.

Keywords

Linoleic acid / Dodecanedioic acid / Escherichia coli / Whole-cell biosynthesis / Multi-enzymatic cascade

Cite this article

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Yi-Ke Qi, Jiang Pan, Zhi-Jun Zhang, Jian-He Xu. Whole-cell one-pot biosynthesis of dodecanedioic acid from renewable linoleic acid. Bioresources and Bioprocessing, 2024, 11(1): 55 https://doi.org/10.1186/s40643-024-00770-8

References

Ahmad A, Akhtar MS, Bhakuni V. Monovalent cation-induced conformational change in glucose oxidase leading to stabilization of the enzyme. Biochemistry, 2001, 40: 1945-1955.
CrossRef Google scholar
Buathong P, Boonvitthya N, Truan G, Chulalaksananukul W. Whole-cell biotransformation of 1,12-dodecanedioic acid from coconut milk factory wastewater by recombinant CYP52A17SS expressing Saccharomyces cerevisiae. Processes, 2020, 8: 969.
CrossRef Google scholar
Buchhaupt M, Guder JC, Etschmann MM, Schrader J. Synthesis of green note aroma compounds by biotransformation of fatty acids using yeast cells coexpressing lipoxygenase and hydroperoxide lyase. Appl Microbiol Biotechnol, 2012, 93(1): 159-168.
CrossRef Google scholar
Cao W, Li H, Luo J, Yin J, Wan Y. High-level productivity of α, ω-dodecanedioic acid with a newly isolated Candida viswanathii strain. J Ind Microbiol Biotechnol, 2017, 44: 1191-1202.
CrossRef Google scholar
Cao W, Liu B, Luo J, Yin J, Wan Y. α, ω-Dodecanedioic acid production by Candida Viswanathii ipe-1 with co-utilization of wheat straw hydrolysates and n-dodecane. Bioresour Technol, 2017, 243: 179-187.
CrossRef Google scholar
Cao W, Wang Y, Luo J, Yin J, Wan Y. Role of oxygen supply in α, ω-dodecanedioic acid biosynthesis from n-dodecane by Candida Viswanathii ipe-1: effect of stirring speed and aeration. Eng Life Sci, 2018, 18: 196-203.
CrossRef Google scholar
Chen Y. Study on the synthesis of dodecanedioic acid by oxidation cyclohexanone. Appl Chem Ind, 2010, 39(4): 614-615.
CrossRef Google scholar
Coenen A, Marti VG, Müller K, Sheremetiev M, Finamore L, Schörken U. Synthesis of polymer precursor 12-oxododecenoic acid utilizing recombinant papaya hydroperoxide lyase in an enzyme cascade. Appl Biochem Biotechnol, 2022, 194: 6194-6212.
CrossRef Google scholar
Coenen A, Ferrer M, Jaeger KE, Schörken U. Synthesis of 12-aminododecenoic acid by coupling transaminase to oxylipin pathway enzymes. Appl Microbiol Biotechnol, 2023, 107: 2209-2221.
CrossRef Google scholar
Feussner I, Wasternack C. The lipoxygenase pathway. Annu Rev Plant Biol, 2002, 53: 275-297.
CrossRef Google scholar
Funk I, Rimmel N, Schorsch C, Sieber V, Schmid J. Production of dodecanedioic acid via biotransformation of low cost plant-oil derivatives using Candida tropicalis. J Ind Microbiol Biotechnol, 2017, 44(10): 1491-1502.
CrossRef Google scholar
Gargouri M, Drouet P, Legoy MD. Hydroperoxide-lyase activity in mint leaves volatile C6-aldehyde production from hydroperoxy-fatty acids. J Biotechnol, 2004, 111(1): 59-65.
CrossRef Google scholar
Gibian MJ, Vandenberg P. Product yield in oxygenation of linoleate by soybean lipoxygenase: the value of the molar extinction coefficient in the spectrophotometric assay. Anal Biochem, 1987, 163(2): 343-349.
CrossRef Google scholar
Grechkin AN. Hydroperoxide lyase and divinyl ether synthase. Prostaglandins Other Lipid Mediat, 2002, 68–69: 457-470.
CrossRef Google scholar
Green KD, Turner MK, Woodley JM. Candida Cloacae oxidation of long-chain fatty acids to dioic acids. Enzyme Microb Technol, 2000, 27: 205-211.
CrossRef Google scholar
Gu S, Zhu F, Zhang L, Wen J. Mid-long chain dicarboxylic acid production via systems metabolic engineering: Progress and prospects. J Agric Food Chem, 2024, 72: 5555-5573.
CrossRef Google scholar
Huf S, Krügener S, Hirth T, Rupp S, Zibek S. Biotechnological synthesis of long-chain dicarboxylic acids as building blocks for polymers. Eur J Lipid Sci Technol, 2011, 113: 548-561.
CrossRef Google scholar
Ivanov I, Heydeck D, Hofheinz K, Roffeis J, O’Donnell VB, Kuhn H, Walther M. Molecular enzymology of lipoxygenases. Arch Biochem Biophys, 2010, 503(2): 161-174.
CrossRef Google scholar
Kim TH, Kang SH, Han JE, Seo EJ, Jeon EY, Choi GE, Park JB, Oh DK. Multilayer engineering of enzyme cascade catalysis for one-pot preparation of nylon monomers from renewable fatty acids. ACS Catal, 2020, 10(9): 4871-4878.
CrossRef Google scholar
Koeduka T. Functional evolution of biosynthetic enzymes that produce plant volatiles. Biosci Biotechnol Biochem, 2018, 82(2): 192-199.
CrossRef Google scholar
Koeduka T, Stumpe M, Matsui K, Kajiwara T, Feussner I. Kinetics of barley FA hydroperoxide lyase are modulated by salts and detergents. Lipids, 2003, 38(11): 1167-1172.
CrossRef Google scholar
Lee H, Han C, Lee HW, Park G, Jeon W, Ahn J, Lee H. Development of a promising microbial platform for the production of dicarboxylic acids from biorenewable resources. Biotechnol Biofuels, 2018, 11(1): 310.
CrossRef Google scholar
Li X, Li Y, Wei D, Li P, Wang L, Feng L. Characterization of a broad-range aldehyde dehydrogenase involved in alkane degradation in Geobacillus thermodenitrificans NG80-2. Microbiol Res, 2010, 165(8): 706-712.
CrossRef Google scholar
Lim S, Yoo Hw, Sarak S, Kim Bg, Yun H. A multienzyme cascade reaction for the production of α,ω-dicarboxylic acids from free fatty acids. J Ind Eng Chem, 2021, 98: 358-365.
CrossRef Google scholar
Liu S, Li C, Fang X, Cao Z. Optimal pH control strategy for high-level production of long-chain α, ω-dicarboxylic acid by Candida tropicalis. Enzyme Microb Technol, 2004, 34: 73-77.
CrossRef Google scholar
Matsui K. Green leaf volatiles: hydroperoxide lyase pathway of oxylipin metabolism. Curr Opin Plant Biol, 2006, 9(3): 274-280.
CrossRef Google scholar
Mishra P, Park GY, Lakshmanan M, Lee HS, Lee H, Chang MW, Ching CB, Ahn J, Lee DY. Genome-scale metabolic modeling and in silico analysis of lipid accumulating yeast Candida tropicalis for dicarboxylic acid production. Biotechnol Bioeng, 2016, 113: 1993-2004.
CrossRef Google scholar
Mu W, Xue Q, Jiang B, Hua Y. Molecular cloning, expression, and enzymatic characterization of Solanum tuberosum Hydroperoxide lyase. Eur Food Res Technol, 2012, 234: 723-731.
CrossRef Google scholar
Noordermeer MA, Veldink GA, Vliegenthart JFG. Spectroscopic studies on the active site of hydroperoxide lyase: the influence of detergents on its conformation. FEBS Lett, 2001, 489(2–3): 229-232.
CrossRef Google scholar
Ogunniyi DS. Castor oil: a vital industrial raw material. Bioresour Technol, 2006, 97(9): 1086-1091.
CrossRef Google scholar
Otte KB, Kittelberger J, Kirtz M, Nestl BM, Hauer B. Whole-cell one-pot biosynthesis of azelaic acid. ChemCatChem, 2014, 6(4): 1003-1009.
CrossRef Google scholar
Pham NN, Chang CW, Chang YH, Tu Y, Chou JY, Wang HY, Hu YC. Rational genome and metabolic engineering of Candida Viswanathii by split CRISPR to produce hundred grams of dodecanedioic acid. Metab Eng, 2023, 77: 76-88.
CrossRef Google scholar
Qi YK, Zheng YC, Zhang ZJ, Xu JH. Efficient transformation of linoleic acid into 13(S)-hydroxy-9,11-(Z,E)-octadecadienoic acid using putative lipoxygenases from cyanobacteria. ACS Sustainable Chem Eng, 2020, 8(14): 5558-5565.
CrossRef Google scholar
Qi YK, Zheng YC, Chen Q, He Y, Zhang ZJ, Xu JH. Improving the oxygenation performance of a cyanobacterial lipoxygenase by oxygen channel engineering. ACS Sustainable Chem Eng, 2021, 9(37): 12514-12519.
CrossRef Google scholar
Sha F, Zheng Y, Chen J, Chen K, Cao F, Yan M, Ouyang P. D-Tagatose manufacture through bio-oxidation of galactitol derived from waste xylose mother liquor. Green Chem, 2018, 20: 2382-2391.
CrossRef Google scholar
Smith WL, Lands WEM. Oxygenation of unsaturated fatty acids by soybean lipoxygenase. J Biol Chem, 1972, 247(4): 1038-1047.
CrossRef Google scholar
Vincenti S, Mariani M, Alberti JC, Jacopini S, de Cara VBB, Berti L, Maury J. Biocatalytic synthesis of natural green leaf volatiles using the lipoxygenase metabolic pathway. Catalysts, 2019, 9(10): 873.
CrossRef Google scholar
Werner N, Zibek S. Biotechnological production of bio-based long-chain dicarboxylic acids with oleogenious yeasts. World J Microbiol Biotechnol, 2017, 33(11): 194.
CrossRef Google scholar
Yi Z-H, Rehm H-J. Metabolic formation of dodecanedioic acid from n-dodecane by a mutant of Candida tropicalis. Eur J Appl Microbiol Biotechnol, 1982, 14: 254-258.
CrossRef Google scholar
Funding
National Key Research and Development Program of China(2022YFC2105900); National Natural Science Foundation of China(21536004)

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