In vitro conversion of glycerol to lactate with thermophilic enzymes

Chalisa Jaturapaktrarak, Suchada Chanprateep Napathorn, Maria Cheng, Kenji Okano, Hisao Ohtake, Kohsuke Honda

Bioresources and Bioprocessing ›› 2014, Vol. 1 ›› Issue (1) : 18.

Bioresources and Bioprocessing All Journals
Bioresources and Bioprocessing ›› 2014, Vol. 1 ›› Issue (1) : 18. DOI: 10.1186/s40643-014-0018-4
Research

In vitro conversion of glycerol to lactate with thermophilic enzymes

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Abstract

Background

In vitro reconstitution of an artificial metabolic pathway has emerged as an alternative approach to conventional in vivo fermentation-based bioproduction. Particularly, employment of thermophilic and hyperthermophilic enzymes enables us a simple preparation of highly stable and selective biocatalytic modules and the construction of in vitro metabolic pathways with an excellent operational stability. In this study, we designed and constructed an artificial in vitro metabolic pathway consisting of nine (hyper)thermophilic enzymes and applied it to the conversion of glycerol to lactate. We also assessed the compatibility of the in vitro bioconversion system with methanol, which is a major impurity in crude glycerol released from biodiesel production processes.

Results

The in vitro artificial pathway was designed to balance the intrapathway consumption and regeneration of energy and redox cofactors. All enzymes involved in the in vitro pathway exhibited an acceptable level of stability at high temperature (60°C), and their stability was not markedly affected by the co-existing of up to 100 mM methanol. The one-pot conversion of glycerol to lactate through the in vitro pathway could be achieved in an almost stoichiometric manner, and 14.7 mM lactate could be produced in 7 h. Furthermore, the in vitro bioconversion system exerted almost identical performance in the presence of methanol.

Conclusions

Many thermophilic enzymes exhibit higher stability not only at high temperatures but also in the presence of denaturants such as detergents and organic solvents than their mesophilic counterparts. In this study, compatibilities of thermophilic enzymes with methanol were demonstrated, indicating the potential applicability of in vitro bioconversion systems with thermophilic enzymes in the conversion of crude glycerol to value-added chemicals.

Keywords

in vitro metabolic engineering / thermophilic enzymes / glycerol / methanol

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Chalisa Jaturapaktrarak, Suchada Chanprateep Napathorn, Maria Cheng, Kenji Okano, Hisao Ohtake, Kohsuke Honda. In vitro conversion of glycerol to lactate with thermophilic enzymes. Bioresources and Bioprocessing, 2014, 1(1): 18 https://doi.org/10.1186/s40643-014-0018-4

References

[1.]
Rabinovitch-Deere CA, Oliver JWK, Rodriguez GM, Atsumi S. Synthetic biology and metabolic engineering approaches to produce biofuels. Chem Rev, 2013, 113: 4611-4632.
CrossRef Google scholar
[2.]
Bond-Watts BB, Bellerose RJ, Chang MCY. Enzyme mechanism as a kinetic control element for designing synthetic biofuel pathways. Nat Chem Biol, 2011, 7: 222-227.
CrossRef Google scholar
[3.]
Guterl JK, Garbe D, Carsten J, Steffler F, Sommer B, Reiße S, Philipp A, Haack M, Rühmann B, Koltermann A, Kettling U, Thomas Brück T, Sieber V. Cell-free metabolic engineering: production of chemicals by minimized reaction cascades. ChemSusChem, 2012, 5: 2165-2172.
CrossRef Google scholar
[4.]
Krutsakorn B, Honda K, Ye X, Imagawa T, Bei X, Okano K, Ohtake H. In vitro production of n-butanol from glucose. Metab Eng, 2013, 20: 84-91.
CrossRef Google scholar
[5.]
Ye X, Honda K, Sakai T, Okano K, Omasa T, Hirota R, Kuroda A, Ohtake H. Synthetic metabolic engineering - a novel, simple technology for designing a chimeric metabolic pathway. Microb Cell Fact, 2012, 11: 120.
CrossRef Google scholar
[6.]
Ye X, Honda K, Morimoto Y, Okano K, Ohtake H. Direct conversion of glucose to malate by synthetic metabolic engineering. J Biotechnol, 2013, 164: 34-40.
CrossRef Google scholar
[7.]
You C, Chen H, Myung S, Sathitsuksanoh N, Ma H, Zhang XZ, Li J, Zhang YHP. Enzymatic transformation of nonfood biomass to starch. Proc Natl Acad Sci U S A, 2013, 110: 7182-7187.
CrossRef Google scholar
[8.]
Woodward J, Orr M, Cordaray K, Greenbaum E. Enzymatic production of biohydrogen. Nature, 2000, 405: 1014-1015.
CrossRef Google scholar
[9.]
Zhang YHP, Evans BR, Mielenz JR, Hopkins RC, Adams MWW. High-yield hydrogen production from starch and water by a synthetic enzymatic pathway. PLoS ONE, 2007, 2: e456.
CrossRef Google scholar
[10.]
Opgenorth PH, Korman TP, Bowie JU. A synthetic biochemistry molecular purge valve module that maintains redox balance. Nat Commun, 2014, 5: 4113.
CrossRef Google scholar
[11.]
Zhu Z, Tam TK, Sun F, You C, Zhang YHP. A high-energy-density sugar biobattery based on a synthetic enzymatic pathway. Nat Commun, 2014, 5: 3026.
[12.]
Ninn PH, Honda K, Sakai T, Okano K, Ohtake H. Assembly and multiple gene expression of thermophilic enzymes in Escherichia coli for in vitro metabolic engineering. Biotechnol Bioeng, 2014 (in press)
[13.]
Owusu RK, Cowan DA. Correlation between microbial protein thermostability and resistance to denaturation in aqueous: organic solvent two-phase systems. Enzyme Microb Technol, 1989, 11: 568-574.
CrossRef Google scholar
[14.]
Atomi H. Recent progress towards the application of hyperthermophiles and their enzymes. Curr Opin Chem Biol, 2005, 9: 166-173.
CrossRef Google scholar
[15.]
Pennacchio A, Pucci B, Secundo F, La Cara F, Rossi M, Raia CA. Purification and characterization of a novel recombinant highly enantioselective short-chain NAD(H)-dependent alcohol dehydrogenase from Thermus thermophilus. Appl Environ Microbiol, 2008, 74: 3949-3958.
CrossRef Google scholar
[16.]
Nguyen AQ, Kim YG, Kim SB, Kim CJ. Improved tolerance of recombinant Escherichia coli to the toxicity of crude glycerol by overexpressing trehalose biosynthetic genes (otsBA) for the production of β-carotene. Bioresour Technol, 2013, 143: 531-537.
CrossRef Google scholar
[17.]
Venkataramanan KP, Boatman JJ, Kurniawan Y, Taconi KA, Bothun GD, Scholz C. Impact of impurities in biodiesel-derived crude glycerol on the fermentation by Clostridium pasteurianum ATCC 6013. Appl Microbiol Biotechnol, 2012, 93: 1325-1335.
CrossRef Google scholar
[18.]
Yang F, Hanna MA, Sun R. Value-added uses for crude glycerol - a byproduct of biodiesel production. Biotechnol Biofuels, 2012, 5: 13.
CrossRef Google scholar
[19.]
Asad-ur-Rehman SWRG, Nomura N, Sato S, Matsumura M. Pretreatment and utilization of raw glycerol from sunflower oil biodiesel for growth and 1,3-propanediol production by Clostridium butyricum. J Chem Technol Biotechnol, 2008, 83: 1072-1080.
CrossRef Google scholar
[20.]
Okano K, Tanaka T, Ogino C, Fukuda H, Kondo A. Biotechnological production of enantiomeric pure lactic acid from renewable resources: recent achievements, perspectives, and limits. Appl Microbiol Biotechnol, 2010, 85: 413-423.
CrossRef Google scholar
[21.]
Koga Y, Haruki M, Morikawa M, Kanaya S. Stability of chimeras of hyperthermophilic and mesophilic glycerol kinases constructed by DNA shuffling. J Biosci Bioeng, 2001, 91: 551-556.
CrossRef Google scholar
[22.]
Yokoyama S, Matsuo Y, Hirota H, Kigawa T, Shirouzu M, Kuroda Y, Kurumizaka H, Kawaguchi S, Ito Y, Shibata T, Kainosho M, Nishimura Y, Inoue Y, Kuramitsu S. Structural genomics projects in Japan. Nat Struct Biol, 2000, 7: 943-945.
CrossRef Google scholar
[23.]
Jia B, Park S-C, Lee S, Pham BP, Yu R, Le TL, Han SW, Yang J-K, Choi M-S, Baumeister W, Cheong G-W. Hexameric ring structure of a thermophilic archaeon NADH oxidase that produces predominantly H2O. FEBS J, 2008, 275: 5355-5366.
CrossRef Google scholar
[24.]
Matsubara K, Yokooji Y, Atomi H, Imanaka T. Biochemical and genetic characterization of the three metabolic routes in Thermococcus kodakarensis linking glyceraldehyde 3-phosphate and 3-phosphoglycerate. Mol Microbiol, 2011, 81: 1300-1312.
CrossRef Google scholar
[25.]
Hansen CF, Hernandez A, Mullan BP, Moore K, Trezona-Murray M, King RH, Pluske JR. A chemical analysis of samples of crude glycerol from the production of biodiesel in Australia, and the effects of feeding crude glycerol to growing-finishing pigs on performance, plasma metabolites and meat quality at slaughter. Anim Prod Sci, 2009, 49 1 54-161.

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