2026-03-01 2026, Volume 18 Issue 1

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  • review-article
    Inga Sarenkova, Inga Ciprovica, Manuel Rendueles
    2026, 18(1): 33377. https://doi.org/10.31083/FBE33377

    Pseudomonas taetrolens is a highly versatile microorganism that has gained significant attention in biotechnology due to its metabolic adaptability and ability to thrive in diverse environmental conditions. Thus, since P. taetrolens efficiently metabolizes organic compounds, P. taetrolens is a promising candidate for sustainable industrial applications. P. taetrolens demonstrates substantial potential in waste utilization by converting dairy byproducts, such as whey, into value-added compounds, including lactobionic acid, thereby advancing the principles of circular economic frameworks. This review provides a comprehensive analysis of the characterization, structural features, and diverse applications of P. taetrolens. In particular, this review explores the enzymatic mechanisms underlying the metabolic pathways of P. taetrolens, focusing on its role in lactose oxidation into lactobionic acid. Additionally, this review underscores the potential of microorganisms in industrial biotechnology and sustainable development practices by showcasing recent advances and ongoing research. This analysis demonstrates how P. taetrolens contributes to innovative solutions in waste utilization, environmental sustainability, and the production of value-added compounds across sectors, including food, pharmaceuticals, and cosmetics.

  • review-article
    Marco Zeppieri, Caterina Gagliano, Fabiana D’Esposito, Mutali Musa, Andrea Russo, Antonio Longo, Rosa Giglio, Daniele Tognetto, Davide Scollo, Federico Visalli
    2026, 18(1): 38592. https://doi.org/10.31083/FBE38592

    Artificial corneas represent a significant breakthrough in addressing global corneal blindness, impacting millions of individuals worldwide. The scarcity of donor tissue and the complications of immune rejection necessitate the development of synthetic alternatives. This review examines key innovations in biomaterials, scaffold design, and regenerative medicine that have informed the development of artificial corneas. Recent studies have demonstrated that polyethylene glycol (PEG)-based hydrogels exhibit 98% light transmittance and an elastic modulus of 1.5 MPa, whereas collagen scaffolds achieve 85% clinical success with <5% inflammatory response. Graphene oxide-based nanocomposites have increased mechanical strength by 25%. Therefore, by synthesizing clinical and preclinical evidence, this article outlines current achievements and unresolved challenges related to scalability, cost, immune compatibility, and regulatory constraints, providing a roadmap for future translational research in corneal tissue engineering.

  • research-article
    Stanislav Kozin, Alexandr Kravtsov, Oksana Lyasota, Anna Dorohova, Vasily Ivlev, Elena Chikhirzhina, Arkady Moiseev, Veronica Nesterova, Polina Babenkova, Konstantin Popov, Liliya Fedulova, Stepan Dzhimak
    2026, 18(1): 39086. https://doi.org/10.31083/FBE39086
    Background:

    Deuterium is unevenly distributed in natural waters, while the same applies to the content of deuterium in ice on Mars. Moreover, changes in the deuterium content of drinking water are known to affect the bodies of mammals. Thus, since plans are in place to send people to Mars in the coming years, understanding the effects of water with a Martian isotopic composition is necessary. Therefore, this study aimed to evaluate the impact of water with an increased deuterium content of 1200 ppm on the dynamics of indicators in the body of mammals.

    Methods:

    The study was conducted on Wistar rats. The metabolic profile of blood and the content of deuterium in it were studied in dynamics by days using nuclear magnetic resonance (NMR) spectroscopy. Additionally, the isotopic composition of brain tissue was studied in dynamics by days using isotope mass spectrometry. A further study was conducted on the functioning of the antioxidant system in blood plasma and brain tissue using PCR analysis, chemiluminescence, and biochemical analysis methods; the intestinal microbiome was also studied. The durations of the animal experiments were 31 (blood and brain study) and 38 (stress-protective activity study) days.

    Results:

    On day 23, the deuterium content in the blood plasma increased to 856 parts per million (ppm), and to 260 ppm in the brain on day 31. This increase led to an imbalance in the antioxidant/prooxidant processes. This effect was accompanied by shifts in the intensity of oxidative processes, alongside changes in enzyme activity and the expression of genes responsible for their synthesis, shifts in amino acid composition, and changes in the concentration of metabolites and microbiome molecules in the blood plasma. By the fifth and eighth days, the number of Bacteroides in the intestines had decreased by 14% and 21.8%, respectively, compared to the values measured on day zero of the experiment. Meanwhile, the population of Firmicutes-type bacteria increased by 12% and 16% on the fifth and eighth days, respectively, compared to the indicators measured on day zero of the experiment.

    Conclusion:

    An increase in the concentration of deuterium in the body promotes the development of a stress reaction and the activation of compensatory mechanisms aimed at adaptation.

  • review-article
    Aayushi C. Shah, Sunayna G. Saluja, Jeel D. Trivedi, Shreeja H. Mehta, Rajanikant Patel, Mehul R. Chorawala, Kiran Dudhat, Bhupendra G. Prajapati
    2026, 18(1): 39323. https://doi.org/10.31083/FBE39323

    Acute myeloid leukemia (AML) is a hematologic malignancy with a poor prognosis and high relapse rates, especially in high-risk patients and older adults. Conventional treatment modalities confer limited benefit, specifically in relapsed and refractory cases. Antibody drug conjugates (ADCs) are a rapidly advancing treatment option that provides a novel approach to treating AML. The design and mechanistic aspects of ADCs have also been discussed. ADCs combine cytotoxic chemotherapeutic drugs with the specificity of monoclonal antibodies. This review primarily focuses on the current role of ADCs in the treatment of AML, including approved agents such as gemtuzumab ozogamicin, as well as others. Moreover, challenges associated with the use of ADCs have been explored, including resistance mechanisms, drug stability, immunogenicity, and cost. This review also highlights and summarizes various ongoing and completed clinical trials, which may provide insight into this treatment approach. Future advancements in AML treatment, including the use of nanoparticles or nanostructures, have also been discussed. In conclusion, this comprehensive review sheds light on the current and prospective future directions of ADCs in the treatment of AML, highlighting their potential to significantly alter the therapeutic landscape for this cancer.

  • research-article
    Elena A. Yildirim, Georgi Yu. Laptev, Daria G. Tiurina, Valentina A. Filippova, Larisa A. Ilina, Natalia I. Novikova, Kseniya A. Sokolova, Ekaterina S. Ponomareva, Evgeni A. Brazhnik, Vasiliy A. Zaikin, Irina A. Klyuchnikova, Vladislav N. Bolshakov, Elena A. Korochkina, Nikolay I. Vorobyov, Darren K. Griffin, Michael N. Romanov
    2026, 18(1): 39439. https://doi.org/10.31083/FBE39439
    Background:

    Significant alterations in feeding, housing, and physiology are observed in dairy cows during the transition period (3 weeks pre- and post-calving), in addition to changes in the composition and abundance of the endometrial microbiota. Thus, this study aimed to evaluate any changes in the composition and predicted metabolic pathways in the cow uterine microbiome during this transition period.

    Methods:

    Scrapings were sampled from the endometrial surface of clinically healthy cows (n = 3) in dynamics as follows: in the 10 Days period before, and on Days 3, 5, and 20 after calving. Total DNA was isolated from the samples, and the composition of the microbial community was assessed using targeted next-generation sequencing (NGS) technology. Based on the subsequent NGS data, the dynamics of the predicted metabolic pathways of the microbiota were evaluated.

    Results:

    Seven superphyla and phyla of microorganisms were found in the endometrial microbiota of cows during the transition period. Among these, the phylum Firmicutes (with a dominant class of Clostridia) and the superphylum Fusobacteriota (represented by a single class of Fusobacteriia) can be considered the dominant bacteria in the endometrium, with representation noted from 25.2 to 68.2% and from 12.3 to 51.1%, respectively. The microbiome composition underwent significant changes (p < 0.05) during the transition period. In particular, the high abundance of the Fusobacteriaceae family (up to 68.2%) in the uterus of clinically healthy cows was unexpected, given the potential association of Fusobacteriaceae with the occurrence of metritis in cows. The numbers of microorganisms in two dominant classes, Fusobacteriia and Clostridia, showed generally opposite changes in their relative abundance during the transition period. The predicted functional potential level for 32 pathways in the endometrium changed (p < 0.05) in cows during the transition period. Indeed, the activity of the predicted pathways, such as pyridoxal 5′-phosphate biosynthesis I and teichoic acid (poly-glycerol) biosynthesis, was lowered on day 3 postpartum (p < 0.05).

    Conclusions:

    Microbiota composition and the activity of the predicted metabolic pathways in the cow endometrium underwent significant changes at different critical stages in the transition period. Moreover, even clinically healthy cows exhibited signs of dysbiotic disorders.

  • research-article
    Nonna Fatima H. Abello, Nobuyuki Takatani, Makiko Aichi, Hiroharu Banno
    2026, 18(1): 39889. https://doi.org/10.31083/FBE39889
    Background:

    Transient transformation is a convenient and less time-consuming method for investigating gene functions compared with production of stable transformants. Most systems for Agrobacterium-mediated plant transformation, regardless of transient or stable transformation, utilize a combination of Agrobacterium strains carrying a helper Ti-plasmid and a binary vector. However, the helper Ti-plasmids which are mega-plasmids with sizes of 200–250 kbp and are difficult to manipulate directly with conventional molecular cloning techniques due to their large sizes.

    Methods:

    A small helper Ti-plasmid, pCU307D with a size of 46 kbp was constructed from pTiEHA101 which is commonly used for plant genetic engineering. They consist of the virulence (vir) region, the mutated replication origin from pTiEHA101, the gentamicin resistance marker and the replication origin for E. coli cells. The abilities of T-DNA transfer were examined by transient expression in Arabidopsis cultured cells.

    Results:

    Efficiencies to transfer T-DNA to plant cells by EHA101 and C58C1 carrying pCU307D were similar, although pCU307D had 2.8-fold higher copy numbers than EHA101. The construction processes of pCU307D eliminated the A281virF gene encoding F-box-like protein which was located outside of the vir region. The A281virF gene was cloned into a binary vector and it was introduced into C58C1 cells with pCU307D which was named as CU307DF. T-DNA transfer efficiencies by EHA101 or CU307DF were examined by GUS activities from transiently transformed T-DNA with the CaMV35S::NLS-GUS cassette in Arabidopsis cells. Co-culture with CU307DF carrying the GUS gene conferred 3.2-fold higher GUS activities, compared to that with its parental strain EHA101.

    Conclusion:

    A new Agrobacterium strain CU307DF has higher capacity for T-DNA transfer, compared with its parental strain EHA101. pCU307D is as small as 46 kbp and can propagate in E. coli, and that may enable to add further modification to it for further improvement of T-DNA transfer by CU307DF.

  • research-article
    Joseph A. Bauer, Annette M. Sysel
    2026, 18(1): 42272. https://doi.org/10.31083/FBE42272
    Background:

    Nitrosylcobalamin (NO-Cbl) is a vitamin B12 analog designed to exploit the “Trojan horse” vulnerability created by the heightened need of cancer cells for cobalamin and one-carbon metabolism. Building on our recent biophysical studies confirming the affinity of NO-Cbl for intrinsic factor, this work aimed to investigate the mechanistic basis for the selective anticancer activity of NO-Cbl through the cobalamin transport axis and lysosomal processing.

    Materials and Methods:

    Human cancer cell lines (NIH-OVCAR-3, MCF-7, WM9, and DU145) were cultured and transfected to overexpress transcobalamin II (TCII). Cell proliferation and cytotoxicity were measured using the sulforhodamine B (SRB) assay. TCII-R (CD320) expression was quantified by flow cytometry. The impact of anti-CD320 antiserum and lysosomal alkalization (chloroquine) on NO-Cbl activity was assessed.

    Results:

    Antiserum inhibition of the TCII receptor resulted in dose-dependent inhibition of NIH-OVCAR-3 and MCF-7 cell proliferation. Lysosomal alkalinization by chloroquine pretreatment abrogated NO-Cbl-induced cytotoxicity in OVCAR-3 cells. Flow cytometric analysis demonstrated an inverse correlation between TCII-R (CD320) expression (MFI ratio) and NO-Cbl ID50. TCII overexpression significantly reduced NO-Cbl ID50 in NIH-OVCAR-3 cells.

    Conclusion:

    NO-Cbl utilizes tumor cell cobalamin transport and processing pathways to deliver nitric oxide selectively to cancer cells. These results, integrated with recent binding studies, validate NO-Cbl as a cobalamin-based targeted anticancer agent with efficacy in tumors expressing high levels of TCII and CD320.

  • research-article
    Reilly Taylor, Stefani Capasso-Villanueva, Anderson Jeon, Kaitlyn Daugherty, Dominic Sandell, Leah Robinson, Hugo Castillo, Alba Chavez
    2026, 18(1): 44075. https://doi.org/10.31083/FBE44075
    Background:

    The global rise of antimicrobial resistance necessitates the development of innovative therapeutic strategies beyond traditional antibiotics. Drug repurposing offers a time- and cost-effective approach by identifying new antimicrobial applications for existing medications. Thus, this study aimed to investigate the antimicrobial and anti-virulence potential of several clinically approved drugs, including fluconazole, buspirone, duloxetine, escitalopram, and finasteride.

    Methods:

    We evaluated the antimicrobial efficacy of the selected compounds against a panel of microorganisms comprising two Gram-negative bacteria (Escherichia coli, Serratia marcescens), two Gram-positive bacteria (Bacillus megaterium, Staphylococcus epidermidis), and two opportunistic yeasts (Candida albicans, Rhodotorula mucilaginosa). Antimicrobial activity was evaluated using growth inhibition and viability assays. Additionally, we investigated the effects of the selected drugs on fungal virulence traits, including biofilm formation and filamentation, and assessed infectivity using a Caenorhabditis elegans host model.

    Results:

    Duloxetine and escitalopram demonstrated broad-spectrum antimicrobial activity, inhibiting bacterial and fungal growth at concentrations below 512 mg/L. Buspirone exhibited selective antimicrobial effects, particularly against Gram-positive bacteria and C. albicans. Although finasteride exhibited limited direct antifungal activity, it significantly disrupted key virulence traits in yeasts, including biofilm formation, morphological transitions, and host infection capacity.

    Conclusion:

    These findings underscore the potential of serotonin reuptake inhibitors and finasteride as candidates for antimicrobial repurposing. By impairing both microbial viability and pathogenicity, these drugs may provide promising avenues for developing adjunct or alternative therapies against resistant bacterial and fungal pathogens.

  • research-article
    Tatyana Ageeva, Rezeda Shigapova, Eldar Davletshin, Elizaveta Plotnikova, Albert Rizvanov, Yana Mukhamedshina
    2026, 18(1): 44274. https://doi.org/10.31083/FBE44274
    Background:

    Adeno-associated viruses (AAVs) are established vectors for efficient gene delivery to the central nervous system (CNS). Increasingly, strategies aim to restrict transduction to specific neuronal subtypes defined by the associated functional properties, thereby enhancing precision and therapeutic potential.

    Methods:

    Recombinant AAV9 vectors carrying fluorescent reporters under the control of cytomegalovirus (CMV), human synapsin (hSyn), or homeobox 9 (Hb9) promoters were delivered intrathecally in Wistar rats. Transgene expression was evaluated 7 days post-injection by confocal microscopy. Neurons in laminae VII–X were quantified across cervical, thoracic, lumbar, and sacral spinal cord levels. Statistical analysis was performed using the Kruskal–Wallis test followed by Mann–Whitney U tests with Bonferroni correction.

    Results:

    In lamina VII, consistent neuronal expression was mediated by hSyn across all spinal levels, with significantly higher transduction at cervical compared to thoracic and lumbar regions (p < 0.01). CMV and Hb9 showed no detectable tropism for this lamina. In lamina VIII, CMV drove markedly higher expression than hSyn and Hb9, with a 2.8-fold difference at the lumbar level (p < 0.001). In lamina X, CMV expression exceeded hSyn at the lumbar and sacral levels (p < 0.05), while Hb9 showed no activity. In lamina IX, all promoters mediated motoneuron transduction, but only Hb9 restricted expression specifically to motoneuron somata. Notably, CMV induced off-target expression in glial cells.

    Conclusions:

    AAV9-mediated expression patterns in the spinal cord are strongly shaped by promoter choice and segmental level. Hb9 provides high motoneuron specificity, hSyn supports broad neuronal activation across laminae VII–X, whereas CMV drives robust but non-specific expression with significant off-target activity. These findings highlight the importance of rational promoter selection for spinal cord gene therapy and strategies aimed at functional recovery in motor system disorders.

  • review-article
    Evelyn Sharon Sukumaran, Nila Ganamurali, Aishwarya PM, Arun Raja, Manoj Kumar Narasimha, Sarvesh Sabarathinam
    2026, 18(1): 46304. https://doi.org/10.31083/FBE46304

    Excessive fructose consumption has emerged as a critical driver of obesity and metabolic dysfunction, with far-reaching implications for multiple organ systems. This review synthesizes current evidence on the biochemical and molecular pathways underlying fructose induced disease mechanisms, discussing how fructose metabolism activates the “survival switch”, promotes fat storage, and generates uric acid, mitochondrial dysfunction, and oxidative stress, thereby disrupting energy homeostasis. Key organ-specific consequences are explored, including hepatic steatosis and progression to non-alcoholic fatty liver disease, pancreatic β-cell dysfunction, renal fibrosis, intestinal barrier disruption with microbial dysbiosis, cardiometabolic impairment, pulmonary inflammation, and neurocognitive decline with relevance to Alzheimer’s disease. Moreover, mechanistic insights highlight the role of fructokinase C activation, adenosine triphosphate (ATP) depletion, leptin resistance, pro-inflammatory signaling (mechanistic target of rapamycin complex-1 (mTORC1), renin angiotensin system (RAS), Toll-like receptor 4 (TLR4)), and cross-talk between fructose metabolism and organ-specific pathophysiology. Animal and human studies consistently reinforce the central role of fructose overload in driving obesity and associated complications. Meanwhile, this review frames fructose not merely as a caloric contributor but as a metabolic disruptor, thereby underscoring the urgent need for public health interventions, dietary regulation, and mechanistic research to mitigate fructose-driven metabolic disease.

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ISSN 1945-0494 (Print)
ISSN 1945-0508 (Online)