Molecular mechanism of the crosstalk between glucocorticoid receptor (GR) and hypoxia-inducible factor 3α (HIF-3α) pathways

Meina Zhang , Yang Guo , Xiaotong Diao , Mengqi Guo , Huiling Teng , Xiangnan Sun , Jingjing Zhuang , Chun Song , Xiangyang Xie , Dalei Wu

Marine Life Science & Technology ›› 2025, Vol. 7 ›› Issue (4) : 779 -791.

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Marine Life Science & Technology ›› 2025, Vol. 7 ›› Issue (4) :779 -791. DOI: 10.1007/s42995-025-00306-9
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Molecular mechanism of the crosstalk between glucocorticoid receptor (GR) and hypoxia-inducible factor 3α (HIF-3α) pathways
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Abstract

Glucocorticoids, crucial regulatory hormones involved in the stress response, significantly influence growth, development, and metabolism through activation of the glucocorticoid receptor (GR). Hypoxia-inducible factor 3 alpha (HIF-3α), the least characterized paralog among three HIF-α proteins, plays a role in adaptation to oxygen level changes and metabolic reprogramming. Despite the potential functional overlaps between GR and HIF-3α pathways in regulating metabolism, their crosstalk remains poorly understood. Here, we demonstrate a regulatory mechanism governing the crosstalk between these two transcription factor pathways. We found that upon ligand activation, GR binds to the intronic region of the HIF3A gene and upregulates its mRNA transcription. Additionally, HIF-3α and GR engage in protein–protein interactions through the oxygen-dependent degradation domain of HIF-3α and all major domains of GR (i.e. the N-terminal, DNA-binding, and ligand-binding domains). Furthermore, we discovered that this interaction results in reciprocal attenuation of the transcriptional activities of both GR and HIF-3α, causing a negative feedback loop upon HIF3A gene expression. The GR-HIF-3α interaction may offer a targetable pivot to modulate these two TF pathways, potentially providing a novel therapeutic avenue for related diseases.

Keywords

Glucocorticoids / Glucocorticoid receptor / HIF-3α / Protein–protein interaction / Transcriptional regulation

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Meina Zhang, Yang Guo, Xiaotong Diao, Mengqi Guo, Huiling Teng, Xiangnan Sun, Jingjing Zhuang, Chun Song, Xiangyang Xie, Dalei Wu. Molecular mechanism of the crosstalk between glucocorticoid receptor (GR) and hypoxia-inducible factor 3α (HIF-3α) pathways. Marine Life Science & Technology, 2025, 7(4): 779-791 DOI:10.1007/s42995-025-00306-9

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References

[1]

Chandra V, Huang P, Potluri N, Wu D, Kim Y, Rastinejad F. Multidomain integration in the structure of the HNF-4alpha nuclear receptor complex. Nature. 2013, 495: 394-398

[2]

Chandra V, Wu D, Li S, Potluri N, Kim Y, Rastinejad F. The quaternary architecture of RARbeta-RXRalpha heterodimer facilitates domain-domain signal transmission. Nat Commun. 2017, 8: 868

[3]

Chen J, Xu L, Zhang XQ, Liu X, Zhang ZX, Zhu QM, Liu JY, Iqbal MO, Ding N, Shao CL, Wei MY, Gu YC. Discovery of a natural small-molecule AMP-activated kinase activator that alleviates nonalcoholic steatohepatitis. Mar Life Sci Technol. 2023, 5: 196-210

[4]

Cuomo F, Coppola A, Botti C, Maione C, Forte A, Scisciola L, Liguori G, Caiafa I, Ursini MV, Galderisi U, Cipollaro M, Altucci L, Cobellis G. Pro-inflammatory cytokines activate hypoxia-inducible factor 3alpha via epigenetic changes in mesenchymal stromal/stem cells. Sci Rep. 2018, 8: 5842

[5]

Cuomo F, Dell'Aversana C, Chioccarelli T, Porreca V, Manfrevola F, Papulino C, Carafa V, Benedetti R, Altucci L, Cobellis G, Cobellis G. HIF3A inhibition triggers browning of white adipocytes via metabolic rewiring. Front Cell Dev Biol. 2021, 9 740203

[6]

Diao X, Ye F, Zhang M, Ren X, Tian X, Lu J, Sun X, Hou Z, Chen X, Li F, Zhuang J, Ding H, Peng C, Rastinejad F, Luo C, Wu D. Identification of oleoylethanolamide as an endogenous ligand for HIF-3alpha. Nat Commun. 2022, 13: 2529

[7]

Dick KJ, Nelson CP, Tsaprouni L, Sandling JK, Aissi D, Wahl S, Meduri E, Morange PE, Gagnon F, Grallert H, Waldenberger M, Peters A, Erdmann J, Hengstenberg C, Cambien F, Goodall AH, Ouwehand WH, Schunkert H, Thompson JR, Spector TD, et al. . DNA methylation and body-mass index: a genome-wide analysis. Lancet. 2014, 383: 1990-1998

[8]

Duan C. Hypoxia-inducible factor 3 biology: complexities and emerging themes. Am J Physiol Cell Physiol. 2016, 310: C260-269

[9]

Fadel L, Dacic M, Fonda V, Sokolsky BA, Quagliarini F, Rogatsky I, Uhlenhaut NH. Modulating glucocorticoid receptor actions in physiology and pathology: insights from coregulators. Pharmacol Ther. 2023, 251 108531

[10]

Feng X, Li G, Wu W, Lyu H, Wang J, Liu C, Zhong C, Shi S, He Z. Expansion and adaptive evolution of the WRKY transcription factor family in Avicennia mangrove trees. Mar Life Sci Technol. 2023, 5: 155-168

[11]

Gertz J, Savic D, Varley KE, Partridge EC, Safi A, Jain P, Cooper GM, Reddy TE, Crawford GE, Myers RM. Distinct properties of cell-type-specific and shared transcription factor binding sites. Mol Cell. 2013, 52: 25-36

[12]

Gu Y, Moran SM, Hogenesch JB, Wartman LD, Bradfield CA. Molecular characterization and chromosomal localization of a third alpha-class hypoxia inducible factor subunit, HIF3alpha. Gene Expr. 1998, 7: 205-213

[13]

Hatanaka M, Shimba S, Sakaue M, Kondo Y, Kagechika H, Kokame K, Miyata T, Hara S. Hypoxia-inducible factor-3alpha functions as an accelerator of 3T3-L1 adipose differentiation. Biol Pharm Bull. 2009, 32: 1166-1172

[14]

Hiltunen J, Helminen L, Paakinaho V. Glucocorticoid receptor action in prostate cancer: the role of transcription factor crosstalk. Front Endocrinol. 2024, 15: 1437179

[15]

Janaszak-Jasiecka A, Bartoszewska S, Kochan K, Piotrowski A, Kalinowski L, Kamysz W, Ochocka RJ, Bartoszewski R, Collawn JF. miR-429 regulates the transition between Hypoxia-Inducible Factor (HIF)1A and HIF3A expression in human endothelial cells. Sci Rep. 2016, 6: 22775

[16]

Kai AK, Chan LK, Lo RC, Lee JM, Wong CC, Wong JC, Ng IO. Down-regulation of TIMP2 by HIF-1alpha/miR-210/HIF-3alpha regulatory feedback circuit enhances cancer metastasis in hepatocellular carcinoma. Hepatology. 2016, 64: 473-487

[17]

Kawahata T, Tanaka K, Oyama K, Ueda J, Okamoto K, Makino Y. HIF3A gene disruption causes abnormal alveoli structure and early neonatal death. PLoS ONE. 2024, 19 e0300751

[18]

Khorasanizadeh S, Rastinejad F. Visualizing the architectures and interactions of nuclear receptors. Endocrinology. 2016, 157: 4212-4221

[19]

Kodama T, Shimizu N, Yoshikawa N, Makino Y, Ouchida R, Okamoto K, Hisada T, Nakamura H, Morimoto C, Tanaka H. Role of the glucocorticoid receptor for regulation of hypoxia-dependent gene expression. J Biol Chem. 2003, 278: 33384-33391

[20]

Leonard MO, Godson C, Brady HR, Taylor CT. Potentiation of glucocorticoid activity in hypoxia through induction of the glucocorticoid receptor. J Immunol. 2005, 174: 2250-2257

[21]

Li F, Song C, Zhang Y, Wu D. Structural overview and perspectives of the nuclear receptors, a major family as the direct targets for small-molecule drugs. Acta Biochim Biophys Sin. 2022, 54: 12-24

[22]

Makino Y, Cao R, Svensson K, Bertilsson G, Asman M, Tanaka H, Cao Y, Berkenstam A, Poellinger L. Inhibitory PAS domain protein is a negative regulator of hypoxia-inducible gene expression. Nature. 2001, 414: 550-554

[23]

Markway BD, Cho H, Zilberman-Rudenko J, Holden P, McAlinden A, Johnstone B. Hypoxia-inducible factor 3-alpha expression is associated with the stable chondrocyte phenotype. J Orthop Res. 2015, 33: 1561-1570

[24]

Maynard MA, Evans AJ, Hosomi T, Hara S, Jewett MA, Ohh M. Human HIF-3alpha4 is a dominant-negative regulator of HIF-1 and is down-regulated in renal cell carcinoma. FASEB J. 2005, 19: 1396-1406

[25]

McGettrick AF, O'Neill LAJ. The role of HIF in immunity and inflammation. Cell Metab. 2020, 32: 524-536

[26]

Nicolaides NC, Galata Z, Kino T, Chrousos GP, Charmandari E. The human glucocorticoid receptor: molecular basis of biologic function. Steroids. 2010, 75: 1-12

[27]

Pasanen A, Heikkila M, Rautavuoma K, Hirsila M, Kivirikko KI, Myllyharju J. Hypoxia-inducible factor (HIF)-3alpha is subject to extensive alternative splicing in human tissues and cancer cells and is regulated by HIF-1 but not HIF-2. Int J Biochem Cell Biol. 2010, 42: 1189-1200

[28]

Ping YQ, Mao C, Xiao P, Zhao RJ, Jiang Y, Yang Z, An WT, Shen DD, Yang F, Zhang H, Qu C, Shen Q, Tian C, Li ZJ, Li S, Wang GY, Tao X, Wen X, Zhong YN, Yang J, et al. . Structures of the glucocorticoid-bound adhesion receptor GPR97-G(o) complex. Nature. 2021, 589: 620-626

[29]

Rastinejad F. Retinoic acid receptor structures: the journey from single domains to full-length complex. J Mol Endocrinol. 2022, 69: T25-T36

[30]

Rastinejad F. The protein architecture and allosteric landscape of HNF4alpha. Front Endocrinol. 2023, 14: 1219092

[31]

Rastinejad F. Allosteric communications between domains of nuclear receptors. Steroids. 2025, 214 109551

[32]

Rastinejad F, Ollendorff V, Polikarpov I. Nuclear receptor full-length architectures: confronting myth and illusion with high resolution. Trends Biochem Sci. 2015, 40: 16-24

[33]

Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res. 2024, 52: D174-D182

[34]

Regan Anderson TM, Ma SH, Raj GV, Cidlowski JA, Helle TM, Knutson TP, Krutilina RI, Seagroves TN, Lange CA. Breast tumor kinase (Brk/PTK6) is induced by HIF, glucocorticoid receptor, and PELP1-mediated stress signaling in triple-negative breast cancer. Cancer Res. 2016, 76: 1653-1663

[35]

Roqueta-Rivera M, Esquejo RM, Phelan PE, Sandor K, Daniel B, Foufelle F, Ding J, Li X, Khorasanizadeh S, Osborne TF. SETDB2 links glucocorticoid to lipid metabolism through insig2a regulation. Cell Metab. 2016, 24: 474-484

[36]

Smoak KA, Cidlowski JA. Mechanisms of glucocorticoid receptor signaling during inflammation. Mech Ageing Dev. 2004, 125: 697-706

[37]

Soccio RE, Chen ER, Rajapurkar SR, Safabakhsh P, Marinis JM, Dispirito JR, Emmett MJ, Briggs ER, Fang B, Everett LJ, Lim HW, Won KJ, Steger DJ, Wu Y, Civelek M, Voight BF, Lazar MA. Genetic variation determines PPARgamma function and anti-diabetic drug response in vivo. Cell. 2015, 162: 33-44

[38]

Sun YY, Wang CY, Hsu MF, Juan SH, Chang CY, Chou CM, Yang LY, Hung KS, Xu J, Lee YH, Hsu CY. Glucocorticoid protection of oligodendrocytes against excitotoxin involving hypoxia-inducible factor-1alpha in a cell-type-specific manner. J Neurosci. 2010, 30: 9621-9630

[39]

Sun X, Jing L, Li F, Zhang M, Diao X, Zhuang J, Rastinejad F, Wu D. Structures of NPAS4-ARNT and NPAS4-ARNT2 heterodimers reveal new dimerization modalities in the bHLH-PAS transcription factor family. Proc Natl Acad Sci USA. 2022, 119 e2208804119

[40]

Tie L, Xiao H, Wu DL, Yang Y, Wang P. A brief guide to good practices in pharmacological experiments: Western blotting. Acta Pharmacol Sin. 2021, 42: 1015-1017

[41]

Timmermans S, Souffriau J, Libert C. A general introduction to glucocorticoid biology. Front Immunol. 2019, 10: 1545

[42]

Tolonen JP, Heikkila M, Malinen M, Lee HM, Palvimo JJ, Wei GH, Myllyharju J. A long hypoxia-inducible factor 3 isoform 2 is a transcription activator that regulates erythropoietin. Cell Mol Life Sci. 2020, 77: 3627-3642

[43]

Vanderhaeghen T, Beyaert R, Libert C. Bidirectional crosstalk between hypoxia inducible factors and glucocorticoid signalling in health and disease. Front Immunol. 2021, 12 684085

[44]

Wagner AE, Huck G, Stiehl DP, Jelkmann W, Hellwig-Burgel T. Dexamethasone impairs hypoxia-inducible factor-1 function. Biochem Biophys Res Commun. 2008, 372: 336-340

[45]

Wang F, Zhang H, Xu N, Huang N, Tian C, Ye A, Hu G, He J, Zhang Y. A novel hypoxia-induced miR-147a regulates cell proliferation through a positive feedback loop of stabilizing HIF-1alpha. Cancer Biol Ther. 2016, 17: 790-798

[46]

Weikum ER, Knuesel MT, Ortlund EA, Yamamoto KR. Glucocorticoid receptor control of transcription: precision and plasticity via allostery. Nat Rev Mol Cell Biol. 2017, 18: 159-174

[47]

Wenger RH. Mammalian oxygen sensing, signalling and gene regulation. J Exp Biol. 2000, 203: 1253-1263

[48]

Wynne K, Rowe C, Delbridge M, Watkins B, Brown K, Addley J, Woods A, Murray H. Antenatal corticosteroid administration for foetal lung maturation. F1000Res. 2020, 9: 219

[49]

Xu F, Deng S, Gavriouchkina D, Zhang G. Transcriptional regulation analysis reveals the complexity of metamorphosis in the Pacific oyster (Crassostrea gigas). Mar Life Sci Technol. 2023, 5: 467-477

[50]

Yang SL, Wu C, Xiong ZF, Fang X. Progress on hypoxia-inducible factor-3: its structure, gene regulation and biological function (Review). Mol Med Rep. 2015, 12: 2411-2416

[51]

Zhang P, Yao Q, Lu L, Li Y, Chen PJ, Duan C. Hypoxia-inducible factor 3 is an oxygen-dependent transcription activator and regulates a distinct transcriptional response to hypoxia. Cell Rep. 2014, 6: 1110-1121

[52]

Zhang C, Dong X, Mao W, Wang C, Ma B, Hu L, Chen R. Hypoxia- and dexamethasone-dependent HIF1alpha-glucocorticoid receptor interaction leads to degradation of glucocorticoid receptor in pituitary adenomas. Am J Transl Res. 2021, 13: 684-695

[53]

Zhou X, Guo X, Chen M, Xie C, Jiang J. HIF-3alpha promotes metastatic phenotypes in pancreatic cancer by transcriptional regulation of the RhoC-ROCK1 signaling pathway. Mol Cancer Res. 2018, 16: 124-134

[54]

Zhuang J, Shang Q, Rastinejad F, Wu D. Decoding allosteric control in hypoxia-inducible factors. J Mol Biol. 2024, 436 168352

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