Computer-aided identification of protein targets of four polyphenols in Alzheimer’s disease (AD) and validation in a mouse AD model

Chaoyun Li, Ping Meng, Benzheng Zhang, Hong Kang, Hanli Wen, Hermann Schluesener, Zhiwei Cao, Zhiyuan Zhang

PDF(5000 KB)
PDF(5000 KB)
Journal of Biomedical Research ›› 2019, Vol. 33 ›› Issue (2) : 101-112. DOI: 10.7555/JBR.32.20180021

Computer-aided identification of protein targets of four polyphenols in Alzheimer’s disease (AD) and validation in a mouse AD model

Author information +
History +

Abstract

Natural polyphenols are a large class of phytochemicals with neuroprotective effects. Four polyphenolic compounds: hesperidin, icariin, dihydromyricetin and baicalin were selected to evaluate their effects on Alzheimer’s disease (AD). We analyzed by an inverse docking procedure (INVDOCK) the potential protein targets of these polyphenols within the KEGG AD pathway. Consequently, their therapeutic effects were evaluated and compared in a transgenic APP/PS1 mouse model of AD. These polyphenols were docked to several targets, including APP, BACE, PSEN, IDE, CASP, calpain and TNF-α, suggesting potential in vivo activities. Five month old transgenic mice were treated with these polyphenols. Icariin and hesperidin restored behavioral deficits and ameliorated Aβ deposits in both the cortex and hippocampus while baicalin and dihydromyricetin showed no substantial effects. Our findings suggest that hesperidin and icariin could be considered potential therapeutic candidates of human AD.

Keywords

Alzheimer's disease / polyphenol / INVDOCK / cerebral amyloidosis / behavioral deficit

Cite this article

Download citation ▾
Chaoyun Li, Ping Meng, Benzheng Zhang, Hong Kang, Hanli Wen, Hermann Schluesener, Zhiwei Cao, Zhiyuan Zhang. Computer-aided identification of protein targets of four polyphenols in Alzheimer’s disease (AD) and validation in a mouse AD model. Journal of Biomedical Research, 2019, 33(2): 101‒112 https://doi.org/10.7555/JBR.32.20180021

References

[1]
Querfurth HW, LaFerla FM. Alzheimer’s disease[J]. N Engl J Med, 2010, 362(4): 329–344
Pubmed
[2]
Mattson MP. Pathways towards and away from Alzheimer’s disease[J]. Nature, 2004, 430(7000): 631–639
Pubmed
[3]
Porat Y, Abramowitz A, Gazit E. Inhibition of amyloid fibril formation by polyphenols: structural similarity and aromatic interactions as a common inhibition mechanism[J]. Chem Biol Drug Des, 2006, 67(1): 27–37
Pubmed
[4]
Chen Z, Nihei K, Tanaka H, Identification of a nitric oxide generation-stimulative principle in Scutellariae radix[J]. Biosci Biotechnol Biochem, 2013, 77(3): 657–659
Pubmed
[5]
Crozier A, Jaganath IB, Clifford MN. Dietary phenolics: chemistry, bioavailability and effects on health[J]. Nat Prod Rep, 2009, 26(8): 1001–1043
Pubmed
[6]
Chen YZ, Zhi DG. Ligand-protein inverse docking and its potential use in the computer search of protein targets of a small molecule[J]. Proteins, 2001, 43(2): 217–226
Pubmed
[7]
Ma C, Tang K, Liu Q, Calmodulin as a potential target by which berberine induces cell cycle arrest in human hepatoma Bel7402 cells[J]. Chem Biol Drug Des, 2013, 81(6): 775–783
Pubmed
[8]
Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes[J]. Nucleic Acids Res, 2000, 28(1): 27–30
Pubmed
[9]
Radde R, Bolmont T, Kaeser SA, Abeta42-driven cerebral amyloidosis in transgenic mice reveals early and robust pathology[J]. EMBO Rep, 2006, 7(9): 940–946
Pubmed
[10]
Zhang ZY, Daniels R, Schluesener HJ. Oridonin ameliorates neuropathological changes and behavioural deficits in a mouse model of cerebral amyloidosis[J]. J Cell Mol Med, 2013, 17(12): 1566–1576
Pubmed
[11]
Wesson DW, Wilson DA. Age and gene overexpression interact to abolish nesting behavior in Tg2576 amyloid precursor protein (APP) mice[J]. Behav Brain Res, 2011, 216(1): 408–413
Pubmed
[12]
Bolivar VJ, Walters SR, Phoenix JL. Assessing autism-like behavior in mice: variations in social interactions among inbred strains[J]. Behav Brain Res, 2007, 176(1): 21–26
Pubmed
[13]
Hibbits N, Pannu R, Wu TJ, Cuprizone demyelination of the corpus callosum in mice correlates with altered social interaction and impaired bilateral sensorimotor coordination[J]. ASN Neuro, 2009, 1(3): 153–164
Pubmed
[14]
de Chaumont F, Dallongeville S, Chenouard N, Icy: an open bioimage informatics platform for extended reproducible research[J]. Nat Methods, 2012, 9(7): 690–696
Pubmed
[15]
Ogata H, Goto S, Sato K, KEGG: Kyoto Encyclopedia of Genes and Genomes[J]. Nucleic Acids Res, 1999, 27(1): 29–34
Pubmed
[16]
Zhang ZY, Li C, Zug C, Icariin ameliorates neuropathological changes, TGF-β1 accumulation and behavioral deficits in a mouse model of cerebral amyloidosis[J]. PLoS One, 2014, 9(8): e104616
Pubmed
[17]
Wesson DW, Wilson DA. Age and gene overexpression interact to abolish nesting behavior in Tg2576 amyloid precursor protein (APP) mice[J]. Behav Brain Res, 2011, 216(1): 408–413
Pubmed
[18]
Li C, Zug C, Qu H, Hesperidin ameliorates behavioral impairments and neuropathology of transgenic APP/PS1 mice[J]. Behav Brain Res, 2015, 281: 32–42
Pubmed
[19]
Bastianetto S, Dumont Y, Han Y, Comparative neuroprotective properties of stilbene and catechin analogs: action via a plasma membrane receptor site?[J]. CNS Neurosci Ther, 2009, 15(1): 76–83
Pubmed
[20]
Bastianetto S, Ramassamy C, Doré S, The Ginkgo biloba extract (EGb 761) protects hippocampal neurons against cell death induced by beta-amyloid[J]. Eur J Neurosci, 2000, 12(6): 1882–1890
Pubmed
[21]
Alvarez JC. High-throughput docking as a source of novel drug leads[J]. Curr Opin Chem Biol, 2004, 8(4): 365–370
Pubmed
[22]
O’Brien RJ, Wong PC. Amyloid precursor protein processing and Alzheimer’s disease[J]. Annu Rev Neurosci, 2011, 34: 185–204
Pubmed
[23]
Cai H, Wang Y, McCarthy D, BACE1 is the major beta-secretase for generation of Abeta peptides by neurons[J]. Nat Neurosci, 2001, 4(3): 233–234
Pubmed
[24]
Selkoe DJ. The cell biology of beta-amyloid precursor protein and presenilin in Alzheimer’s disease[J]. Trends Cell Biol, 1998, 8(11): 447–453
Pubmed
[25]
Imbimbo BP, Giardino L, Sivilia S, CHF5074, a novel gamma-secretase modulator, restores hippocampal neurogenesis potential and reverses contextual memory deficit in a transgenic mouse model of Alzheimer’s disease[J]. J Alzheimers Dis, 2010, 20(1): 159–173
Pubmed
[26]
Donmez G, Wang D, Cohen DE, SIRT1 suppresses beta-amyloid production by activating the alpha-secretase gene ADAM10[J]. Cell, 2010, 142(2): 320–332
Pubmed
[27]
Leissring MA, Farris W, Chang AY, Enhanced proteolysis of beta-amyloid in APP transgenic mice prevents plaque formation, secondary pathology, and premature death[J]. Neuron, 2003, 40(6): 1087–1093
Pubmed
[28]
Chae SS, Yoo CB, Jo C, Caspases-2 and-8 are involved in the presenilin1/gamma-secretase-dependent cleavage of amyloid precursor protein after the induction of apoptosis[J]. J Neurosci Res, 2010, 88(9): 1926–1933
Pubmed
[29]
Chen Y, McPhie DL, Hirschberg J, The amyloid precursor protein-binding protein APP-BP1 drives the cell cycle through the S-M checkpoint and causes apoptosis in neurons[J]. J Biol Chem, 2000, 275(12): 8929–8935
Pubmed
[30]
Wolfe MS, Guénette SY. APP at a glance[J]. J Cell Sci, 2007, 120(Pt 18): 3157–3161
Pubmed
[31]
Li Y, Nowotny P, Holmans P, Association of late-onset Alzheimer’s disease with genetic variation in multiple members of the GAPD gene family[J]. Proc Natl Acad Sci U S A, 2004, 101(44): 15688–15693
Pubmed
[32]
Rogers J, Webster S, Lue LF, Inflammation and Alzheimer’s disease pathogenesis[J]. Neurobiol Aging, 1996, 17(5): 681–686
Pubmed
[33]
Saha RN, Liu X, Pahan K. Up-regulation of BDNF in astrocytes by TNF-alpha: a case for the neuroprotective role of cytokine[J]. J Neuroimmune Pharmacol, 2006, 1(3): 212–222
Pubmed
[34]
Li C, Ebrahimi A, Schluesener H. Drug pipeline in neurodegeneration based on transgenic mice models of Alzheimer’s disease[J]. Ageing Res Rev, 2013, 12(1): 116–140
Pubmed
[35]
Liang B, Duan BY, Zhou XP, Calpain activation promotes BACE1 expression, amyloid precursor protein processing, and amyloid plaque formation in a transgenic mouse model of Alzheimer disease[J]. J Biol Chem, 2010, 285(36): 27737–27744
Pubmed
[36]
Trinchese F, Fa’ M, Liu S, Inhibition of calpains improves memory and synaptic transmission in a mouse model of Alzheimer disease[J]. J Clin Invest, 2008, 118(8): 2796–2807
Pubmed
[37]
Huang H, Zhang Y, Yang R, Determination of baicalin in rat cerebrospinal fluid and blood using microdialysis coupled with ultra-performance liquid chromatography-tandem mass spectrometry[J]. J Chromatogr B Analyt Technol Biomed Life Sci, 2008, 874(1-2): 77–83
Pubmed
[38]
Youdim KA, Dobbie MS, Kuhnle G, Interaction between flavonoids and the blood-brain barrier: in vitro studies[J]. J Neurochem, 2003, 85(1): 180–192
Pubmed
[39]
Ye LK, Chen JM, Liu SH, Pharmacokinetics of icariin in rats[J]. Chung Kuo Yao Hsueh Tsa Chih, 1999, 34: 33–36.
[40]
Xing J, Chen XY, Zhang SQ, Liquid chromatography-electrospray ion trap mass spectrometry analysis of baicalin and its isomer in rats urine[J]. Chinese Mass Spectrom Societ, 2004, 25: 129–133.
[41]
Li YQ. The studies of quality specification of ampelopsis grossedentata and the pharmacokinetics of its active component dihydromyricetin in rat[D]. Shenyang: Shenyang Pharmaceutical University, 2003.

Acknowledgments

The authors would like to thank Prof. M. Jucker for providing male transgenic APP/PS1-(21) mice. The study was supported by the China Scholarship Council (CSC) and the Deutscher Akademischer Austausch-Dienst (DAAD). The authors declare there is no conflict of interest.

RIGHTS & PERMISSIONS

2018 2018 by the Journal of Biomedical Research.
PDF(5000 KB)

Accesses

Citations

Detail

Sections
Recommended

/