Adsorption of herring sperm DNA onto pine sawdust biochar: Thermodynamics and site energy distribution

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Frontiers of Environmental Science & Engineering ›› 2022, Vol. 16 ›› Issue (11) : 144. DOI: 10.1007/s11783-022-1579-7
RESEARCH ARTICLE

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Adsorption of herring sperm DNA onto pine sawdust biochar: Thermodynamics and site energy distribution

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● Adsorption of environmental deoxyribonucleic acid on biochar was studied.

● π−π interaction and electrostatic repulsion worked in the adsorption.

● Thermodynamics indicated the adsorption was spontaneous and endothermic.

Abstract

Environmental deoxyribonucleic acid (eDNA), which includes antibiotic resistance genes, is ubiquitous in the environment. The interactions between eDNA and biochar, a promising material widely used in soil amendment and water treatment, greatly affect the environmental behavior of eDNA. Hitherto few experimental evidences are available yet, especially on the information of thermodynamics and energy distribution to explains the interactions between biochar and eDNA. This study investigated the adsorption of herring sperm DNA (hsDNA) on pine sawdust biochar, with a specific emphasis on the adsorption thermodynamics and site energy distribution. The adsorption of hsDNA on biochar was enhanced by an increase in the pyrolysis and adsorption temperatures. The higher surface area, stronger π−π interaction, and weaker electrostatic repulsion between hsDNA and biochars prepared at high pyrolysis temperatures facilitated the adsorption of hsDNA. The thermodynamics indicated that the adsorption of hsDNA on biochar was spontaneous and endothermic. Therefore, higher temperature was beneficial for the adsorption of hsDNA on biochar; this was well explained by the increase in E* and F(E*) with the adsorption temperature. These results are useful for evaluating the migration and transformation of eDNA in the presence of biochar.

Keywords

Environmental deoxyribonucleic acid / Antibiotic resistance genes / Biochar / Adsorption thermodynamics

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. . Frontiers of Environmental Science & Engineering. 2022, 16(11): 144 https://doi.org/10.1007/s11783-022-1579-7

参考文献

[1]
AhmadA, LohM, AzizJ. (2007). Preparation and characterization of activated carbon from oil palm wood and its evaluation on methylene blue adsorption. Dyes and Pigments, 75( 2): 263– 272
CrossRef ADS Google scholar
[2]
BounaasM, BouguettouchaA, ChebliD, GaticaJ M, VidalH. (2021). Role of the wild carob as biosorbent and as precursor of a new high-surface-area activated carbon for the adsorption of methylene blue. Arabian Journal for Science and Engineering, 46( 1): 325– 341
CrossRef ADS Google scholar
[3]
CaiP Huang Q LiM LiangW ( 2008). Binding and degradation of DNA on montmorillonite coated by hydroxyl aluminum species. Colloids and Surfaces. B, Biointerfaces, 62( 2): 299− 306
Pubmed
[4]
ChenB, ZhouD, ZhuL. (2008). Transitional adsorption and partition of nonpolar and polar aromatic contaminants by biochars of pine needles with different pyrolytic temperatures. Environmental Science & Technology, 42( 14): 5137– 5143
CrossRef ADS Google scholar
[5]
ChenH, ZhangY, LiJ, ZhangP, LiuN. (2019). Preparation of pickling-reheating activated alfalfa biochar with high adsorption efficiency for p-nitrophenol: characterization, adsorption behavior, and mechanism. Environmental Science and Pollution Research International, 26( 15): 15300– 15313
CrossRef ADS Google scholar
[6]
ChenY, LiuJ, ZengQ, LiangZ, YeX, LvY, LiuM. (2021). Preparation of Eucommia ulmoides lignin-based high-performance biochar containing sulfonic group: Synergistic pyrolysis mechanism and tetracycline hydrochloride adsorption. Bioresource Technology, 329 : 124856
CrossRef ADS Google scholar
[7]
DingZ, WanY, HuX, WangS, ZimmermanA R, GaoB. (2016). Sorption of lead and methylene blue onto hickory biochars from different pyrolysis temperatures: Importance of physicochemical properties. Journal of Industrial and Engineering Chemistry, 37 : 261– 267
CrossRef ADS Google scholar
[8]
DongX, SinghB P, LiG, LinQ, ZhaoX. (2019). Biochar increased field soil inorganic carbon content five years after application. Soil & Tillage Research, 186 : 36– 41
CrossRef ADS Google scholar
[9]
FangJ, JinL, MengQ, WangD, LinD. (2021). Interactions of extracellular DNA with aromatized biochar and protection against degradation by DNAse I. Journal of Environmental Sciences (China), 101 : 205– 216
CrossRef ADS Google scholar
[10]
GaoN, LiA, QuanC, DuL, DuanY. (2013). TG–FTIR and Py–GC/MS analysis on pyrolysis and combustion of pine sawdust. Journal of Analytical and Applied Pyrolysis, 100 : 26– 32
CrossRef ADS Google scholar
[11]
GardnerC M, GunschC K. (2017). Adsorption capacity of multiple DNA sources to clay minerals and environmental soil matrices less than previously estimated. Chemosphere, 175 : 45– 51
CrossRef ADS Google scholar
[12]
HongM, ZhangL, TanZ, HuangQ. (2019). Effect mechanism of biochar’s zeta potential on farmland soil’s cadmium immobilization. Environmental Science and Pollution Research International, 26( 19): 19738– 19748
CrossRef ADS Google scholar
[13]
HouY, WuP, ZhuN. (2014). The protective effect of clay minerals against damage to adsorbed DNA induced by cadmium and mercury. Chemosphere, 95 : 206– 212
CrossRef ADS Google scholar
[14]
JelavićS, StippS L S, BovetN. (2018). Adsorption of organic ligands on low surface charge clay minerals: the composition in the aqueous interface region. Physical Chemistry Chemical Physics, 20( 25): 17226– 17233
CrossRef ADS Google scholar
[15]
JiangS, NguyenT A, RudolphV, YangH, ZhangD, OkY S, HuangL. (2017). Characterization of hard- and softwood biochars pyrolyzed at high temperature. Environmental Geochemistry and Health, 39( 2): 403– 415
CrossRef ADS Google scholar
[16]
LengL, XiongQ, YangL, LiH, ZhouY, ZhangW, JiangS, LiH, HuangH. (2021). An overview on engineering the surface area and porosity of biochar. Science of the Total Environment, 763 : 144204
CrossRef ADS Google scholar
[17]
Levy-BoothD J, CampbellR G, GuldenR H, HartM M, PowellJ R, KlironomosJ N, Peter PaulsK, SwantonC J, TrevorsJ T, DunfieldK E. (2007). Cycling of extracellular DNA in the soil environment. Soil Biology & Biochemistry, 39( 12): 2977– 2991
CrossRef ADS Google scholar
[18]
LianF, YuW, ZhouQ, GuS, WangZ, XingB. (2020). Size matters: Nano-biochar triggers decomposition and transformation inhibition of antibiotic resistance genes in aqueous environments. Environmental Science & Technology, 54( 14): 8821– 8829
CrossRef ADS Google scholar
[19]
LiuF, WangS, FanJ, MaG. (2012). Adsorption of natural organic matter surrogates from aqueous solution by multiwalled carbon nanotubes. Journal of Physical Chemistry C, 116( 49): 25783– 25789
CrossRef ADS Google scholar
[20]
LiuJ, ZhouB, ZhangH, MaJ, MuB, ZhangW. (2019). A novel Biochar modified by Chitosan-Fe/S for tetracycline adsorption and studies on site energy distribution. Bioresource Technology, 294 : 122152
CrossRef ADS Google scholar
[21]
LiuT, WangY, ZangQ, ZhongG. (2018a). Hydrothermal synthesis, structural characterization, and interaction mechanism with DNA of Copper(II) complex containing 2,2′-bipyridine. Bioinorganic Chemistry and Applications, 2018 : 8459638
CrossRef ADS Google scholar
[22]
LiuY Dai Q JinX DongX PengJ WuM Liang N PanB XingB( 2018b). Negative impacts of biochars on urease activity: High pH, heavy metals, polycyclic aromatic hydrocarbons, or free radicals? Environmental Science & Technology, 52( 21): 12740− 12747
Pubmed
[23]
MinX Han P YangH KimH Tong M ( 2014). Influence of sulfate and phosphate on the deposition of plasmid DNA on silica and alumina-coated surfaces. Colloids and Surfaces. B, Biointerfaces, 118: 83− 89
Pubmed
[24]
PanB, ZhangD, LiH, WuM, WangZ, XingB. (2013). Increased adsorption of sulfamethoxazole on suspended carbon nanotubes by dissolved humic acid. Environmental Science & Technology, 47( 14): 7722– 7728
CrossRef ADS Google scholar
[25]
PietramellaraG, AscherJ, CeccheriniM T, NannipieriP, WenderothD. (2007). Adsorption of pure and dirty bacterial DNA on clay minerals and their transformation frequency. Biology and Fertility of Soils, 43( 6): 731– 739
CrossRef ADS Google scholar
[26]
PolyF, ChenuC, SimonetP, RouillerJ, Jocteur MonrozierL. (2000). Differences between linear chromosomal and supercoiled plasmid DNA in their mechanisms and extent of adsorption on clay minerals. Langmuir, 16( 3): 1233– 1238
CrossRef ADS Google scholar
[27]
PrasannamedhaG, KumarP S, MehalaR, SharumithaT J, SurendharD. (2021). Enhanced adsorptive removal of sulfamethoxazole from water using biochar derived from hydrothermal carbonization of sugarcane bagasse. Journal of Hazardous Materials, 407 : 124825
CrossRef ADS Google scholar
[28]
PrudenA, PeiR, StorteboomH, CarlsonK H. (2006). Antibiotic resistance genes as emerging contaminants: studies in northern Colorado. Environmental Science & Technology, 40( 23): 7445– 7450
CrossRef ADS Google scholar
[29]
QianL, ZhangW, YanJ, HanL, GaoW, LiuR, ChenM. (2016). Effective removal of heavy metal by biochar colloids under different pyrolysis temperatures. Bioresource Technology, 206 : 217– 224
CrossRef ADS Google scholar
[30]
RajabiH, MoslehM H, MandalP, Lea-LangtonA, SedighiM. (2021). Sorption behaviour of xylene isomers on biochar from a range of feedstock. Chemosphere, 268 : 129310
CrossRef ADS Google scholar
[31]
SchmidtM P, MartínezC E. (2017). Ironing out genes in the environment: An experimental study of the DNA-goethite interface. Langmuir, 33( 34): 8525– 8532
CrossRef ADS Google scholar
[32]
ShengX, QinC, YangB, HuX, LiuC, WaigiM G, LiX, LingW. (2019). Metal cation saturation on montmorillonites facilitates the adsorption of DNA via cation bridging. Chemosphere, 235 : 670– 678
CrossRef ADS Google scholar
[33]
ShiL, ZhangD, ZhaoJ, XueJ, YinM, LiangA, PanB. (2021). New insights into the different adsorption kinetics of gallic acid and tannic acid on minerals via 1H NMR relaxation of bound water. Science of the Total Environment, 767 : 144447
CrossRef ADS Google scholar
[34]
TeixidóM, PignatelloJ J, BeltránJ L, GranadosM, PecciaJ. (2011). Speciation of the ionizable antibiotic sulfamethazine on black carbon (biochar). Environmental Science & Technology, 45( 23): 10020– 10027
CrossRef ADS Google scholar
[35]
WangB, ZhangY, ZhuD, LiH. (2020a). Assessment of bioavailability of biochar-sorbed tetracycline to Escherichia coli for activation of antibiotic resistance genes. Environmental Science & Technology, 54( 20): 12920– 12928
CrossRef ADS Google scholar
[36]
WangC, WangT, LiW, YanJ, LiZ, AhmadR, HerathS K, ZhuN. (2014a). Adsorption of deoxyribonucleic acid (DNA) by willow wood biochars produced at different pyrolysis temperatures. Biology and Fertility of Soils, 50( 1): 87– 94
CrossRef ADS Google scholar
[37]
WangP, LiuX, YuB, WuX, XuJ, DongF, ZhengY. (2020b). Characterization of peanut-shell biochar and the mechanisms underlying its sorption for atrazine and nicosulfuron in aqueous solution. Science of the Total Environment, 702 : 134767
CrossRef ADS Google scholar
[38]
WangY, YinR, LiuR. (2014b). Characterization of biochar from fast pyrolysis and its effect on chemical properties of the tea garden soil. Journal of Analytical and Applied Pyrolysis, 110 : 375– 381
CrossRef ADS Google scholar
[39]
WangZ, YuX, PanB, XingB. (2010). Norfloxacin sorption and its thermodynamics on surface-modified carbon nanotubes. Environmental Science & Technology, 44( 3): 978– 984
CrossRef ADS Google scholar
[40]
WuJ, WangH, ZhuA, LongF. (2018). Adsorption kinetics of single-stranded DNA on functional silica surfaces and its influence factors: An evanescent-wave biosensor study. ACS Omega, 3( 5): 5605– 5614
CrossRef ADS Google scholar
[41]
WuJ, WangT, ZhangY, PanW P. (2019). The distribution of Pb(II)/Cd(II) adsorption mechanisms on biochars from aqueous solution: Considering the increased oxygen functional groups by HCl treatment. Bioresource Technology, 291 : 121859
CrossRef ADS Google scholar
[42]
WuW, YangM, FengQ, McgroutherK, WangH, LuH, ChenY. (2012). Chemical characterization of rice straw-derived biochar for soil amendment. Biomass and Bioenergy, 47 : 268– 276
CrossRef ADS Google scholar
[43]
XiaoX, ChenB, ZhuL. (2014). Transformation, morphology, and dissolution of silicon and carbon in rice straw-derived biochars under different pyrolytic temperatures. Environmental Science & Technology, 48( 6): 3411– 3419
CrossRef ADS Google scholar
[44]
YinD, WangX, ChenC, PengB, TanC, LiH. (2016). Varying effect of biochar on Cd, Pb and As mobility in a multi-metal contaminated paddy soil. Chemosphere, 152 : 196– 206
CrossRef ADS Google scholar
[45]
YuW, LiN, TongD, ZhouC, LinC, XuC. (2013). Adsorption of proteins and nucleic acids on clay minerals and their interactions: A review. Applied Clay Science, 80−81 : 443– 452
CrossRef ADS Google scholar
[46]
YuanL, ChenL, ChenX, LiuR, GeG. (2017). In situ measurement of surface functional groups on silica nanoparticles using solvent relaxation nuclear magnetic resonance. Langmuir, 33( 35): 8724– 8729
CrossRef ADS Google scholar
[47]
YuanY, LiJ, DaiH. (2021). Microcystin-LR sorption and desorption by diverse biochars: Capabilities, and elucidating mechanisms from novel insights of sorption domains and site energy distribution. Science of the Total Environment, 754 : 141921
CrossRef ADS Google scholar
[48]
ZhangL, LiH, ChenF, ZhangD, WuM, PanB, XingB. (2017). New insights provided by solvent relaxation NMR-measured surface area in liquids to explain phenolics sorption on silica nanoparticles. Environmental Science. Nano, 4( 3): 577– 584
CrossRef ADS Google scholar
[49]
ZhangQ PengQ ShuX Mo D JiangD ( 2019). Spectroscopic analysis of tylosin adsorption on extracellular DNA reveals its interaction mechanism. Colloids and Surfaces. B, Biointerfaces, 183: 110431
Pubmed
[50]
ZhaoR, MaX, XuJ, ZhangQ. (2018). Removal of the pesticide imidacloprid from aqueous solution by biochar derived from peanut shell. BioResources, 13( 3): 5656– 5669
[51]
ZhongW, YuJ, LiangY. (2003). Chlorobenzylidine-herring sperm DNA interaction: Binding mode and thermodynamic studies. Spectrochimica Acta. Part A: Molecular and Biomolecular Spectroscopy, 59( 6): 1281– 1288
CrossRef ADS Google scholar
[52]
ZhouG, QiuX, WuX, LuS. (2021). Horizontal gene transfer is a key determinant of antibiotic resistance genes profiles during chicken manure composting with the addition of biochar and zeolite. Journal of Hazardous Materials, 408 : 124883
CrossRef ADS Google scholar

Acknowledgements

This work was supported by the National Natural Science Foundation of China (No. 42167030), Yunnan Young and Middle-aged Academic and Technical Leaders Reserve Talents (No. 2018HB008), Yunnan Ten Thousand Talents Plan Young and Elite Talents Project (No. YNWR-QNBJ-2018-336), and Yunnan Provincial Scientific Innovation Team of Soil Environment and Ecological Safety (No. 2019HC008).

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Supplementary material is available in the online version of this article at https://doi.org/10.1007/s11783-022-1579-7 and is accessible for authorized users.

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2022 Higher Education Press
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